Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00090X
(351 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ272660-1|ABB83829.1| 166|Homo sapiens HES5 protein. 29 3.1
BC087840-1|AAH87840.1| 172|Homo sapiens HES5 protein protein. 29 3.1
AB002351-1|BAA20810.2| 1614|Homo sapiens KIAA0353 protein. 29 4.1
BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear prote... 28 7.2
BC018722-1|AAH18722.1| 553|Homo sapiens alveolar soft part sarc... 28 7.2
BC006152-1|AAH06152.1| 348|Homo sapiens ASPSCR1 protein protein. 28 7.2
BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein. 28 7.2
AY034078-1|AAK59694.1| 100|Homo sapiens ASPL/TFE3 type 2 fusion... 28 7.2
AY034077-1|AAK59693.1| 65|Homo sapiens ASPL/TFE3 type 1 fusion... 28 7.2
AK122593-1|BAC56934.1| 229|Homo sapiens FLJ00419 protein protein. 28 7.2
AK057851-1|BAB71595.1| 501|Homo sapiens protein ( Homo sapiens ... 28 7.2
AK057403-1|BAB71472.1| 647|Homo sapiens protein ( Homo sapiens ... 28 7.2
AF324219-1|AAK08959.2| 553|Homo sapiens ASPL protein. 28 7.2
AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar t... 28 9.5
AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar t... 28 9.5
AK095895-1|BAC04644.1| 238|Homo sapiens protein ( Homo sapiens ... 28 9.5
AB231861-1|BAE19679.1| 1950|Homo sapiens low-density lipoprotein... 28 9.5
AB084910-1|BAD83615.1| 1905|Homo sapiens low density lipoprotein... 28 9.5
>DQ272660-1|ABB83829.1| 166|Homo sapiens HES5 protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 180 PRVTPLAPVAASPPCACGRASVVARAVGRPDCXAPGWR 293
P P AP AA PP +A+ A A +P C WR
Sbjct: 129 PAKEPKAPGAAPPPALSAKATAAAAAAHQPACGL--WR 164
>BC087840-1|AAH87840.1| 172|Homo sapiens HES5 protein protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 180 PRVTPLAPVAASPPCACGRASVVARAVGRPDCXAPGWR 293
P P AP AA PP +A+ A A +P C WR
Sbjct: 135 PAKEPKAPGAAPPPALSAKATAAAAAAHQPACGL--WR 170
>AB002351-1|BAA20810.2| 1614|Homo sapiens KIAA0353 protein.
Length = 1614
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 286 PGAXQSGRPTARAT-TLARPHAQGGDAATGARGVTRGRSQ 170
PG +S RP+ RA+ ARP +GG+ TG R G Q
Sbjct: 2 PGLSRS-RPSLRASGAAARPERRGGEDETGTRPGQEGAGQ 40
>BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear protein
NHN1 protein.
Length = 953
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = -1
Query: 306 HNGRLAIQARXSRDGRQRAPQR*HARTRKGETPQREQEG*REGDPSGDAKNESQRR 139
HN R + R R+ RQR +R R R+ E QRE+E RE + D E QRR
Sbjct: 399 HNYRERERER-ERENRQRERERERERDRERERRQRERE--REREHERD--KERQRR 449
>BC018722-1|AAH18722.1| 553|Homo sapiens alveolar soft part sarcoma
chromosome region, candidate 1 protein.
Length = 553
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 231 RTRKGETPQREQEG*REGDPSGDAKNE 151
+++ G+ PQ+EQE RE DP + + E
Sbjct: 284 KSKSGQDPQQEQEQERERDPQQEQERE 310
>BC006152-1|AAH06152.1| 348|Homo sapiens ASPSCR1 protein protein.
Length = 348
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 231 RTRKGETPQREQEG*REGDPSGDAKNE 151
+++ G+ PQ+EQE RE DP + + E
Sbjct: 207 KSKSGQDPQQEQEQERERDPQQEQERE 233
>BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein.
Length = 718
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = -1
Query: 306 HNGRLAIQARXSRDGRQRAPQR*HARTRKGETPQREQEG*REGDPSGDAKNESQRR 139
HN R + R R+ RQR +R R R+ E QRE+E RE + D E QRR
Sbjct: 164 HNYRERERER-ERENRQRERERERERDRERERRQRERE--RERERERD--KERQRR 214
>AY034078-1|AAK59694.1| 100|Homo sapiens ASPL/TFE3 type 2 fusion
protein protein.
Length = 100
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 231 RTRKGETPQREQEG*REGDPSGDAKNE 151
+++ G+ PQ+EQE RE DP + + E
Sbjct: 2 KSKSGQDPQQEQEQERERDPQQEQERE 28
>AY034077-1|AAK59693.1| 65|Homo sapiens ASPL/TFE3 type 1 fusion
protein protein.
Length = 65
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 231 RTRKGETPQREQEG*REGDPSGDAKNE 151
+++ G+ PQ+EQE RE DP + + E
Sbjct: 2 KSKSGQDPQQEQEQERERDPQQEQERE 28
>AK122593-1|BAC56934.1| 229|Homo sapiens FLJ00419 protein protein.
Length = 229
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = -1
Query: 306 HNGRLAIQARXSRDGRQRAPQR*HARTRKGETPQREQEG*REGDPSGDAKNESQRR 139
HN R + R R+ RQR +R R R+ E QRE+E RE + D E QRR
Sbjct: 72 HNYRERERER-ERENRQRERERERERDRERERRQRERE--RERERERD--KERQRR 122
>AK057851-1|BAB71595.1| 501|Homo sapiens protein ( Homo sapiens
cDNA FLJ25122 fis, clone CBR06126. ).
Length = 501
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 231 RTRKGETPQREQEG*REGDPSGDAKNE 151
+++ G+ PQ+EQE RE DP + + E
Sbjct: 207 KSKSGQDPQQEQEQERERDPQQEQERE 233
>AK057403-1|BAB71472.1| 647|Homo sapiens protein ( Homo sapiens
cDNA FLJ32841 fis, clone TESTI2003325. ).
Length = 647
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 231 RTRKGETPQREQEG*REGDPSGDAKNE 151
+++ G+ PQ+EQE RE DP + + E
Sbjct: 284 KSKSGQDPQQEQEQERERDPQQEQERE 310
>AF324219-1|AAK08959.2| 553|Homo sapiens ASPL protein.
Length = 553
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 231 RTRKGETPQREQEG*REGDPSGDAKNE 151
+++ G+ PQ+EQE RE DP + + E
Sbjct: 284 KSKSGQDPQQEQEQERERDPQQEQERE 310
>AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 222 CACGRASVVARAVGRPDCXAPGWRVAHC 305
C C +V + G C PGW AHC
Sbjct: 494 CQCAHEAVCSPQTGACTC-TPGWHGAHC 520
>AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 222 CACGRASVVARAVGRPDCXAPGWRVAHC 305
C C +V + G C PGW AHC
Sbjct: 494 CQCAHEAVCSPQTGACTC-TPGWHGAHC 520
>AK095895-1|BAC04644.1| 238|Homo sapiens protein ( Homo sapiens
cDNA FLJ38576 fis, clone HCHON2007482. ).
Length = 238
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 322 PRESRTQWATRHPGAXQSGRPTARATTLARPHAQGGDAATGARGVT 185
PR W + + AR + A+ A GG A G+RGVT
Sbjct: 34 PRAGSLLWRGKEGASGSEPSSAARRSLPAQLAAPGGGARPGSRGVT 79
>AB231861-1|BAE19679.1| 1950|Homo sapiens low-density lipoprotein
receptor-related protein 4 protein.
Length = 1950
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 204 VAASPPCACGRA--SVVARAVGRPDCXAPGWR 293
+A+SP CACGR+ + A+G C W+
Sbjct: 67 LASSPECACGRSHFTCAVSALGECTCIPAQWQ 98
>AB084910-1|BAD83615.1| 1905|Homo sapiens low density lipoprotein
receptor-related protein 10 protein.
Length = 1905
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 204 VAASPPCACGRA--SVVARAVGRPDCXAPGWR 293
+A+SP CACGR+ + A+G C W+
Sbjct: 19 LASSPECACGRSHFTCAVSALGECTCIPAQWQ 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,161,527
Number of Sequences: 237096
Number of extensions: 618321
Number of successful extensions: 2375
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2374
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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