Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00089
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical ... 117 7e-27
AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical ... 117 7e-27
AF067937-5|AAF99917.2| 422|Caenorhabditis elegans Hypothetical ... 97 1e-20
Z81457-3|CAB03815.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.16
U39997-2|AAK68388.1| 378|Caenorhabditis elegans Dehydrogenases,... 32 0.48
AC006677-5|AAF39950.1| 280|Caenorhabditis elegans Hypothetical ... 30 1.9
Z83238-12|CAB05801.1| 279|Caenorhabditis elegans Hypothetical p... 29 2.6
Z81513-14|CAB04187.1| 279|Caenorhabditis elegans Hypothetical p... 29 2.6
U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical pr... 29 3.4
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 29 3.4
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 29 3.4
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 29 3.4
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 3.4
AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical ... 28 5.9
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 28 7.8
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 28 7.8
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 28 7.8
AC006677-6|AAF39953.1| 279|Caenorhabditis elegans Dehydrogenase... 28 7.8
>AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical
protein F22F7.1b protein.
Length = 392
Score = 117 bits (282), Expect = 7e-27
Identities = 53/82 (64%), Positives = 66/82 (80%)
Frame = +2
Query: 260 GPYRLYGEQVVKAAIESKTHYVDVSGEPEFMELMQLNYNEQAKDAGVYVISACGFDSIPC 439
GPYRLYGE VVKAA+E+ +VD+SGEP ++E MQ Y++QAK+ GVYV+SACG+DSIP
Sbjct: 90 GPYRLYGEAVVKAAVENGASHVDISGEPAWIEKMQQKYSKQAKEQGVYVVSACGWDSIPA 149
Query: 440 DLGVIHLMKNFEGVLNSVESYI 505
DLGV L KNF G LN VES++
Sbjct: 150 DLGVNFLKKNFHGDLNHVESFV 171
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/87 (43%), Positives = 62/87 (71%)
Frame = +3
Query: 3 DLIIFGATGFTGSRAVLEMIRLSKKYPALTWGIAGRSEKKLEELKQEATQKSGEDQTNLK 182
D++++GA+GFTG+ V+E + S+++ L++ +AGRSEKKL E+ + +QK+G+D +N
Sbjct: 5 DVVVYGASGFTGAY-VVEYLVNSEQFEGLSFAVAGRSEKKLREVLRNISQKTGKDVSNAA 63
Query: 183 TFIADVSDEKSLRSMCEQARVVVNVAG 263
+AD +DE+SL M QA VV+N G
Sbjct: 64 VIVADSADERSLNEMARQANVVINAVG 90
>AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical
protein F22F7.1a protein.
Length = 426
Score = 117 bits (282), Expect = 7e-27
Identities = 53/82 (64%), Positives = 66/82 (80%)
Frame = +2
Query: 260 GPYRLYGEQVVKAAIESKTHYVDVSGEPEFMELMQLNYNEQAKDAGVYVISACGFDSIPC 439
GPYRLYGE VVKAA+E+ +VD+SGEP ++E MQ Y++QAK+ GVYV+SACG+DSIP
Sbjct: 90 GPYRLYGEAVVKAAVENGASHVDISGEPAWIEKMQQKYSKQAKEQGVYVVSACGWDSIPA 149
Query: 440 DLGVIHLMKNFEGVLNSVESYI 505
DLGV L KNF G LN VES++
Sbjct: 150 DLGVNFLKKNFHGDLNHVESFV 171
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/87 (43%), Positives = 62/87 (71%)
Frame = +3
Query: 3 DLIIFGATGFTGSRAVLEMIRLSKKYPALTWGIAGRSEKKLEELKQEATQKSGEDQTNLK 182
D++++GA+GFTG+ V+E + S+++ L++ +AGRSEKKL E+ + +QK+G+D +N
Sbjct: 5 DVVVYGASGFTGAY-VVEYLVNSEQFEGLSFAVAGRSEKKLREVLRNISQKTGKDVSNAA 63
Query: 183 TFIADVSDEKSLRSMCEQARVVVNVAG 263
+AD +DE+SL M QA VV+N G
Sbjct: 64 VIVADSADERSLNEMARQANVVINAVG 90
>AF067937-5|AAF99917.2| 422|Caenorhabditis elegans Hypothetical
protein F22F7.2 protein.
Length = 422
Score = 96.7 bits (230), Expect = 1e-20
Identities = 40/82 (48%), Positives = 62/82 (75%)
Frame = +2
Query: 260 GPYRLYGEQVVKAAIESKTHYVDVSGEPEFMELMQLNYNEQAKDAGVYVISACGFDSIPC 439
GP+RL+GE VVKAA+E+ + +DV+GEPE++E M+ Y + AK+ VY++SACG+DSIP
Sbjct: 92 GPFRLHGEAVVKAAVENGANQIDVAGEPEWIERMEAKYGQMAKNNNVYIVSACGWDSIPA 151
Query: 440 DLGVIHLMKNFEGVLNSVESYI 505
D GV L + F+G L +++++
Sbjct: 152 DFGVKLLKRYFDGHLQRIDAFL 173
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +3
Query: 3 DLIIFGATGFTGSRAVLEMIRLSKKYPALTWGIAGRSEKKLEELKQEATQKSGED-QTNL 179
D++I+GATG TG + + E + K+ + IAGRSEKKLEE+ ++ + +G +T +
Sbjct: 6 DVVIYGATGVTGGK-IFETLISCGKFDNYSIAIAGRSEKKLEEVLEKLEKSTGTSLKTRI 64
Query: 180 KTFIADVSDEKSLRSMCEQARVVVNVAG 263
+ D ++E+S+ M +A+++VN G
Sbjct: 65 GLLVCDSTNEESMGKMARRAKLIVNAVG 92
>Z81457-3|CAB03815.1| 279|Caenorhabditis elegans Hypothetical
protein C01G12.5 protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +3
Query: 99 IAGRSEKKLEELKQEATQKSGEDQTNLKTFIADVSDEKSLRSMCEQARVVVNVAGRTDYT 278
I GR+ ++LEE KQE +SG + ++ + IAD++ E E V++ GR D
Sbjct: 35 ITGRNAQRLEETKQEIL-RSGVPEDHVLSIIADLATES---GQIELMNSTVDIFGRLDIL 90
Query: 279 ENRS 290
N +
Sbjct: 91 VNNA 94
>U39997-2|AAK68388.1| 378|Caenorhabditis elegans Dehydrogenases,
short chain protein5 protein.
Length = 378
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +3
Query: 9 IIFGATGFTGSRAVLEMIRLSKKYPALTWGIAGRSEKKLEELKQEATQKSGEDQTNLKTF 188
++ G T G LE+ + + + + GR+ KKL+ +K E +K + Q +KTF
Sbjct: 92 VVSGGTDGIGKAYTLELAKRGLR----KFVLIGRNPKKLDSVKSEIEEKHSDAQ--IKTF 145
Query: 189 IADV--SDEKSLRSMCEQARV--VVNVAG 263
+ D D SLR V VVN G
Sbjct: 146 VFDFGSGDFSSLRDYISDIDVGFVVNSVG 174
>AC006677-5|AAF39950.1| 280|Caenorhabditis elegans Hypothetical
protein R05D8.7 protein.
Length = 280
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 99 IAGRSEKKLEELKQEATQKSGEDQTNLKTFIADVSDE 209
I GRS ++LEE +Q KSG + + + +ADV+ E
Sbjct: 35 ITGRSSERLEETRQ-IILKSGVSEKQVNSVVADVTTE 70
>Z83238-12|CAB05801.1| 279|Caenorhabditis elegans Hypothetical
protein F26D2.15 protein.
Length = 279
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 99 IAGRSEKKLEELKQEATQKSGEDQTNLKTFIADV-SDEKSLRSMCEQAR 242
I GR+ ++L+E + E +KSG N+ +ADV +DE +R + + R
Sbjct: 35 ITGRNAERLKETRHE-IKKSGIPAENILAIVADVITDEGQMRLINDTVR 82
>Z81513-14|CAB04187.1| 279|Caenorhabditis elegans Hypothetical
protein F26D2.15 protein.
Length = 279
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 99 IAGRSEKKLEELKQEATQKSGEDQTNLKTFIADV-SDEKSLRSMCEQAR 242
I GR+ ++L+E + E +KSG N+ +ADV +DE +R + + R
Sbjct: 35 ITGRNAERLKETRHE-IKKSGIPAENILAIVADVITDEGQMRLINDTVR 82
>U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical
protein C06E4.6 protein.
Length = 274
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 99 IAGRSEKKLEELKQEATQKSGEDQTNLKTFIADVS 203
I GR +LEE +Q A K+G TN+ + +ADV+
Sbjct: 35 ITGRDAARLEETRQ-AILKAGISATNVNSVVADVT 68
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical protein
Y6B3B.1 protein.
Length = 1829
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +3
Query: 126 EELKQEATQKSGEDQTNLKTFIADV---SDEKSLRSM 227
+EL +E +++ GEDQ + +TF D+ DE+ L S+
Sbjct: 1372 KELLKEISEQDGEDQRSFRTFRMDLKPSQDEEELESL 1408
>Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical
protein F25D1.5 protein.
Length = 277
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 99 IAGRSEKKLEELKQEATQKSGEDQTNLKTFIADVSD 206
I GR+E +LEE KQ+ K+G + +ADV++
Sbjct: 35 ITGRNEDRLEETKQQIL-KAGVPAEKINAVVADVTE 69
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 114 EKKLEELKQEATQKSGEDQTNLKTFIADVSDEKSLRSMCEQA 239
E +L+E+KQ++ +S E ++N K IAD+ + L ++A
Sbjct: 793 ETQLDEIKQQSKIESSEQESNDKQTIADLRKKLDLEKAHKKA 834
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 114 EKKLEELKQEATQKSGEDQTNLKTFIADVSDEKSLRSMCEQA 239
E +L+E+KQ++ +S E ++N K IAD+ + L ++A
Sbjct: 793 ETQLDEIKQQSKIESSEQESNDKQTIADLRKKLDLEKAHKKA 834
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +3
Query: 126 EELKQEATQKSGEDQTNLKTFIADV---SDEKSLRSM 227
+EL +E +++ GEDQ + +TF D+ DE+ L S+
Sbjct: 1372 KELLKEISEQDGEDQRSFRTFRMDLKPSQDEEELESL 1408
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 108 RSEKKLEELKQEATQKSGEDQTNLKTFIADVSDEKSLRSMCEQARVVVNVAGRTDYTENR 287
+S ++L +++A QK +TN +F+A+++ E + + A V +N A R Y R
Sbjct: 157 KSARRLN-FERDAEQKKDSTKTNNSSFVAEMTREYEKIVISKGAPVPINKANRNLYRNPR 215
>AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical
protein R05D8.9 protein.
Length = 281
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 99 IAGRSEKKLEELKQEATQKSGEDQTNLKTFIADVSDEKSLRSMCEQARVVVNVAGRTDYT 278
+ GR+ ++LEE +QE KSG ++++ + D++ EK E + GR D
Sbjct: 36 VTGRNAERLEETRQEIL-KSGVPESHVLSVATDLAAEK---GQDELVNSTIQKFGRLDIL 91
Query: 279 ENRS 290
N +
Sbjct: 92 VNNA 95
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 141 EATQKSGEDQTNLKTFIADVSDEKSLRSMCEQARV 245
E T K ++ ++ IAD+SD K+L++ Q ++
Sbjct: 1867 ELTWKKNTEKDPIRRMIADISDAKTLKTYASQVQM 1901
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 141 EATQKSGEDQTNLKTFIADVSDEKSLRSMCEQARV 245
E T K ++ ++ IAD+SD K+L++ Q ++
Sbjct: 1905 ELTWKKNTEKDPIRRMIADISDAKTLKTYASQVQM 1939
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 141 EATQKSGEDQTNLKTFIADVSDEKSLRSMCEQARV 245
E T K ++ ++ IAD+SD K+L++ Q ++
Sbjct: 1867 ELTWKKNTEKDPIRRMIADISDAKTLKTYASQVQM 1901
>AC006677-6|AAF39953.1| 279|Caenorhabditis elegans Dehydrogenases,
short chain protein14 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 99 IAGRSEKKLEELKQEATQKSGEDQTNLKTFIADVSDEKSLRSMCEQARVVVNVAGRTDYT 278
I GR+ +LEE +QE KSG + ++ + D++ EK E + GR D
Sbjct: 35 ITGRNADRLEETRQEIL-KSGVPEDHVLSIATDLATEK---GQDELVNSTIQKFGRLDIL 90
Query: 279 ENRS 290
N +
Sbjct: 91 VNNA 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,717,868
Number of Sequences: 27780
Number of extensions: 339761
Number of successful extensions: 1016
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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