Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00088
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    25   0.62 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    25   0.82 
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   7.6  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   7.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 191 LTMHYTGTLDDGHKFDSSYDRVNL 262
           L +HY  + D  HK+ + YD ++L
Sbjct: 12  LFVHYGWSEDTTHKYTTKYDNIDL 35


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +2

Query: 161 CTTKSKHGDMLTMHY--TGTLDDGHKFDSSYDRVNLLRSK 274
           CT K K G    +HY      D  ++ ++ YD+  + R K
Sbjct: 78  CTEKQKEGSRKIIHYLIDNKRDWWNELEAKYDKDGVYRQK 117


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 329 THMSSKPWSHPLITCPTPIWNVKG*RDHNSSRTCVRRLACQC 204
           TH+  + + + L+   T  +  K   D + +   +RRL  QC
Sbjct: 54  THLGGEDFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQC 95


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 329 THMSSKPWSHPLITCPTPIWNVKG*RDHNSSRTCVRRLACQC 204
           TH+  + + + L+   T  +  K   D + +   +RRL  QC
Sbjct: 54  THLGGEDFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQC 95


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 110 GPEVTELKTEVVSVPEGCT 166
           GP++TEL+ E +   +  T
Sbjct: 282 GPQITELEPETIESQDAIT 300


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 110 GPEVTELKTEVVSVPEGCT 166
           GP++TEL+ E +   +  T
Sbjct: 515 GPQITELEPETIESQDAIT 533


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 110 GPEVTELKTEVVSVPEGCT 166
           GP++TEL+ E +   +  T
Sbjct: 515 GPQITELEPETIESQDAIT 533


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,246
Number of Sequences: 336
Number of extensions: 3378
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)