Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00088
         (721 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    73   9e-15
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.5  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 72.9 bits (171), Expect = 9e-15
 Identities = 30/63 (47%), Positives = 42/63 (66%)
 Frame = +1

Query: 256 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 435
           +PF F +G G+VI+GWD+G+  M VG++ KL       YG RG   VIPP+A L F+VEL
Sbjct: 45  KPFKFSVGKGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVEL 104

Query: 436 INI 444
           + +
Sbjct: 105 LRV 107



 Score = 39.1 bits (87), Expect = 1e-04
 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 137 EVVSVPEGC-TTKSKHGDMLTMHYTGTLDDGHKFDSSYDR 253
           ++V +  G  TT  K G    +HYTGTLDDG  FDSS  R
Sbjct: 4   QIVPIANGDQTTFPKPGQTAVVHYTGTLDDGTVFDSSRTR 43


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 476  RKSTPIRTTCSPRRSER-LFEEADGSRRR 559
            RK   +R T +PR SER L  ++  S  R
Sbjct: 925  RKGPQVRPTLTPRHSERALLSDSTSSSER 953


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +3

Query: 366  GLRRARSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGN 482
            G RR+RSR R  S      RSG    +      K V G+
Sbjct: 1159 GSRRSRSRSRSRSGSRSRSRSGSGSRQASPISRKSVSGS 1197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,788
Number of Sequences: 2352
Number of extensions: 14527
Number of successful extensions: 51
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)