Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00088
(721 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 24 1.3
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 24 1.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 2.9
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 23 3.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.8
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 3.8
AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 22 5.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 6.7
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 22 6.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.7
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 6.7
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 24.2 bits (50), Expect = 1.3
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 355 PASLGYGERGAGNVIPPHATLHFEVELINIGDSPPATNVFKEIDADKDNM 504
P + Y R N+ P L F +EL + +SP F + D K +
Sbjct: 111 PIATKYLRRYEDNIFLPEDCLLFTIELDRVLESPRGKYEFSKYDKLKKKL 160
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 24.2 bits (50), Expect = 1.3
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 355 PASLGYGERGAGNVIPPHATLHFEVELINIGDSPPATNVFKEIDADKDNM 504
P + Y R N+ P L F +EL + +SP F + D K +
Sbjct: 126 PIATKYLRRYEDNIFLPEDCLLFTIELDRVLESPRGKYEFSKYDKLKKKL 175
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 2.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 597 SHDKLVEEIFQHEDQDKNGFISPEE 671
S + LV +F H D++ NG + EE
Sbjct: 233 SKEYLVSIMFSHYDRNNNGNLEREE 257
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 2.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 516 LRGEHVVLIGVDFLE-HVCGRWRVTDVDQLHFE 421
+RG++VV IGVD E + W + +V + E
Sbjct: 185 IRGKNVVDIGVDLSEFYTSVEWDILEVPAVRNE 217
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 22.6 bits (46), Expect = 3.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 150 FQKDAPRSPSTAICSPCTTL 209
F+K ++P +C PCT++
Sbjct: 102 FRKVITKAPLECMCRPCTSV 121
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 636 DQDKNGFISPEE 671
DQ KNG +SP+E
Sbjct: 212 DQIKNGIVSPQE 223
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 636 DQDKNGFISPEE 671
DQ KNG +SP+E
Sbjct: 207 DQIKNGIVSPQE 218
>AB023025-1|BAA74592.1| 133|Apis mellifera actin protein.
Length = 133
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 2 VGNARFSCKKKLFVSSTMTTLRC 70
+GN RF C + LF S + C
Sbjct: 25 IGNERFRCPEALFQPSFLGMEAC 47
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 2 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 49
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 2 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 49
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 2 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 49
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 2 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 49
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 2 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 49
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 2 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 49
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.8 bits (44), Expect = 6.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +3
Query: 270 PNWRWASDQ 296
PNW WA +Q
Sbjct: 109 PNWSWAKNQ 117
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -3
Query: 689 VLRSREFLRADEAVFVLIFVLEDFLNKFIVTFQHLLDVFAYFTTVGGNHLLLQIVA 522
+ S + LR +FV+ + DFL F ++ +++ + Y T V G L QI A
Sbjct: 42 IFLSTKSLRTPSNLFVINLAISDFLMMFCMSPPMVINCY-YETWVLG-PLFCQIYA 95
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 298
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 298
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 298
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 298
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 298
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 298
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 381 RSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGNRRR*GQHALREEVS 524
RS RD S Y DQ + H R + +RRR + RE+ S
Sbjct: 251 RSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKS 298
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 113 PEVTELKTEVVSVPEGCTT 169
PEVT L +++V E C+T
Sbjct: 488 PEVTMLFSDIVGFTEICST 506
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,293
Number of Sequences: 438
Number of extensions: 3895
Number of successful extensions: 32
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -