Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00087
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.3  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   2.3  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   3.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   4.0  
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    24   4.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.0  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       24   5.2  
DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    24   5.2  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           24   5.2  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           24   5.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   9.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   9.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.1  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 272 TPPKDSSLPTDILKILTTFKISSVSLVKRAYTMEPGT 382
           T  ++  +  +   +  T  ++ V L  RAY +EPGT
Sbjct: 334 TEREEQQMQKEAAVMARTMNLNQVCLCFRAYRVEPGT 370


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 560 SRLVSQGIKNAMSFAYKLWHEGPQGHRRRLLPERI 664
           SRL++    + M +A  +WHE       R L ER+
Sbjct: 796 SRLLAAVADSVMRYAAPVWHEALNTRECRRLLERV 830


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -1

Query: 606 YANDMAFLMPCETSRETTSRQTPEPWLSSSCAHLHRVDVVAARNQVVQV 460
           YA+D+A L+P  T+ E  +R              H +++  A+ + V +
Sbjct: 718 YADDLALLVPATTTDEVRARAEEAVDQVQRWMQQHGLELAPAKTEAVLI 766


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 29  EGKVTNLDRVRGFRRSYNVNEQFALVSK 112
           E  V +   ++GF+R Y V E+  LV K
Sbjct: 389 ESGVQSAKLIKGFKREYPVLEKLVLVLK 416


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 138 PTGFPSCLWTTATLPVTSETAA 203
           P  FP+   TT TL  TS TAA
Sbjct: 31  PWSFPALSPTTTTLATTSGTAA 52


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 557 VSRLVSQGIKNAMSFAYKLWHEGPQGHRRRLLPE 658
           V+R VS G         +LW+ G  G  R  LPE
Sbjct: 622 VTRRVSAGCPQGSMLGPRLWNVGYDGVLRLELPE 655


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 458 SLIDLASAKTI--FVLNSVWVFKSAGSSYPAP*YKP 357
           S + L +A+T+  F  N+ + F++    YP P Y P
Sbjct: 28  SSLCLTTAQTVQQFAYNTDFFFRNPSEIYPQPVYVP 63


>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 423 KNGLCRRKVNQRSLVQLGYGRRL 491
           K+   R KVN +S + LGY ++L
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQKL 250


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 423 KNGLCRRKVNQRSLVQLGYGRRL 491
           K+   R KVN +S + LGY ++L
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQKL 250


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 423 KNGLCRRKVNQRSLVQLGYGRRL 491
           K+   R KVN +S + LGY ++L
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQKL 250


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 165 STDTTGILLGICFPLLWPLL 106
           S +  G+LL +C PLL P L
Sbjct: 411 SINLAGVLLRLCQPLLKPQL 430


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 77  YNVNEQFALVSKGHSKGKQIPNRIP 151
           Y  +EQF     G+ KG+Q  +  P
Sbjct: 649 YGFHEQFCQECTGYKKGEQCEDECP 673


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 201 PPSLM*LEVSLSSTDTTGILLGICFPLLWPLLTS 100
           PP +  L + L+      +L+G+   LLW +LTS
Sbjct: 763 PPKVFMLGIVLAVIAVV-VLIGMAVLLLWKVLTS 795


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 548 RDVVSRLVSQGIKNAMSFAYKLWHE 622
           R  +SRL++    + M +A  +WHE
Sbjct: 848 RTSMSRLLANVADSTMRYAAPVWHE 872


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,041
Number of Sequences: 2352
Number of extensions: 12336
Number of successful extensions: 45
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)