Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00087
         (693 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.              32   1.7  
AK131360-1|BAD18512.1| 1186|Homo sapiens  mRNA.  protein.              32   1.7  
AK128516-1|BAC87475.1|  788|Homo sapiens protein ( Homo sapiens ...    32   1.7  
AF501281-1|AAO59914.1| 2127|Homo sapiens ATP binding cassette tr...    32   1.7  

>AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.
          Length = 5058

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
 Frame = -1

Query: 327  NVVRIFRISVG--NDESFG--GVDNPGDAAAHRLLIGPVLMVT---VLTPPSLM*LEVSL 169
            N++ +  IS+G    E FG  GV+  G +   ++L G V + +   ++  P  M   V L
Sbjct: 4733 NIIAVQDISLGIPKGECFGLLGVNGAGKSTTFKMLNGEVSLTSGHAIIRTP--MGDAVDL 4790

Query: 168  SSTDTTGILLGIC 130
            SS  T G+L+G C
Sbjct: 4791 SSAGTAGVLIGYC 4803


>AK131360-1|BAD18512.1| 1186|Homo sapiens  mRNA.  protein.
          Length = 1186

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
 Frame = -1

Query: 327  NVVRIFRISVG--NDESFG--GVDNPGDAAAHRLLIGPVLMVT---VLTPPSLM*LEVSL 169
            N++ +  IS+G    E FG  GV+  G +   ++L G V + +   ++  P  M   V L
Sbjct: 993  NIIAVQDISLGIPKGECFGLLGVNGAGKSTTFKMLNGEVSLTSGHAIIRTP--MGDAVDL 1050

Query: 168  SSTDTTGILLGIC 130
            SS  T G+L+G C
Sbjct: 1051 SSAGTAGVLIGYC 1063


>AK128516-1|BAC87475.1|  788|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46673 fis, clone TRACH3009061, weakly  similar
           to ATP-binding cassette, sub-family A, member 1. ).
          Length = 788

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
 Frame = -1

Query: 327 NVVRIFRISVG--NDESFG--GVDNPGDAAAHRLLIGPVLMVT---VLTPPSLM*LEVSL 169
           N++ +  IS+G    E FG  GV+  G +   ++L G V + +   ++  P  M   V L
Sbjct: 463 NIIAVQDISLGIPKGECFGLLGVNGAGKSTTFKMLNGEVSLTSGHAIIRTP--MGDAVDL 520

Query: 168 SSTDTTGILLGIC 130
           SS  T G+L+G C
Sbjct: 521 SSAGTAGVLIGYC 533


>AF501281-1|AAO59914.1| 2127|Homo sapiens ATP binding cassette
            transporter A13 protein.
          Length = 2127

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
 Frame = -1

Query: 327  NVVRIFRISVG--NDESFG--GVDNPGDAAAHRLLIGPVLMVT---VLTPPSLM*LEVSL 169
            N++ +  IS+G    E FG  GV+  G +   ++L G V + +   ++  P  M   V L
Sbjct: 1802 NIIAVQDISLGIPKGECFGLLGVNGAGKSTTFKMLNGEVSLTSGHAIIRTP--MGDAVDL 1859

Query: 168  SSTDTTGILLGIC 130
            SS  T G+L+G C
Sbjct: 1860 SSAGTAGVLIGYC 1872


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,066,167
Number of Sequences: 237096
Number of extensions: 1934743
Number of successful extensions: 10511
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10510
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)