Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00084X
(535 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 3.9
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 22 3.9
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.8
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.8
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.8
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.8
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.8
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 6.8
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 6.8
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 9.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 9.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 9.0
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.8 bits (44), Expect = 3.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 284 PVLLTISSSLFGYFCTHRRHFC 219
P+L+ I+S G FC+ +FC
Sbjct: 241 PLLMKIASQFVGIFCS--LYFC 260
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 21.8 bits (44), Expect = 3.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 284 PVLLTISSSLFGYFCTHRRHFC 219
P+L+ I+S G FC+ +FC
Sbjct: 66 PLLMKIASQFVGIFCS--LYFC 85
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.8
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -1
Query: 133 VEIGFNDFGLRWND 92
+ + +ND+ L+WN+
Sbjct: 56 LSLEWNDYNLKWNE 69
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.8
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -1
Query: 133 VEIGFNDFGLRWND 92
+ + +ND+ L+WN+
Sbjct: 56 LSLEWNDYNLKWNE 69
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.8
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -1
Query: 133 VEIGFNDFGLRWND 92
+ + +ND+ L+WN+
Sbjct: 56 LNLEWNDYNLKWNE 69
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.8
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -1
Query: 133 VEIGFNDFGLRWND 92
+ + +ND+ L+WN+
Sbjct: 56 LNLEWNDYNLKWNE 69
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.8
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -1
Query: 133 VEIGFNDFGLRWND 92
+ + +ND+ L+WN+
Sbjct: 56 LNLEWNDYNLKWNE 69
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 253 NKLDDIVKSTGGQIVYN 303
NKL D+ KS G VY+
Sbjct: 356 NKLADLYKSLGPDSVYS 372
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 253 NKLDDIVKSTGGQIVYN 303
NKL D+ KS G VY+
Sbjct: 248 NKLADLYKSLGPDSVYS 264
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 20.6 bits (41), Expect = 9.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 212 QAYKNADDEYKSIQTNW 262
+AY+ A EYK QTN+
Sbjct: 358 RAYQVAVLEYKGTQTNY 374
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 9.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 198 QKSNYKLTKMPTMSTKVS 251
+K YKL KMP++S +S
Sbjct: 142 RKCLYKLWKMPSLSEFLS 159
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.6 bits (41), Expect = 9.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 198 QKSNYKLTKMPTMSTKVS 251
+K YKL KMP++S +S
Sbjct: 142 RKCLYKLWKMPSLSEFLS 159
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,154
Number of Sequences: 336
Number of extensions: 2137
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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