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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00084X
         (535 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g04480.1 68416.m00475 endoribonuclease L-PSP family protein c...    30   1.1  
At1g51960.1 68414.m05857 calmodulin-binding family protein conta...    28   4.5  
At1g03055.2 68414.m00279 expressed protein                             28   4.5  
At1g03055.1 68414.m00278 expressed protein                             28   4.5  
At5g40820.1 68418.m04956 FAT domain-containing protein / phospha...    27   5.9  
At5g25130.1 68418.m02977 cytochrome P450 family protein CYTOCHRO...    27   5.9  
At1g77450.1 68414.m09019 no apical meristem (NAM) family protein...    27   5.9  
At1g67500.1 68414.m07688 DNA polymerase family B protein similar...    27   5.9  
At3g25420.1 68416.m03161 serine carboxypeptidase S10 family prot...    27   7.9  

>At3g04480.1 68416.m00475 endoribonuclease L-PSP family protein
           contains Pfam domain PF01902: Domain of unknown function
          Length = 715

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +3

Query: 267 YS*EHWRPDCLQRRSIH-RVSVAWKTTSIERLGASKCGHNKI*IT--FYVYLKGQTHNTK 437
           Y  E W  DC+Q+R +  +V VA  + S E +   +    ++ I   F VYL  +T +  
Sbjct: 575 YKPEKWHQDCVQKRVVDGKVCVAVLSISAELMRKLQGEEEELEIVSRFCVYLLNKTLSEN 634

Query: 438 RASEEDSW*RKIPFS 482
             S +D+   +I FS
Sbjct: 635 SFSWQDTTSLRIHFS 649


>At1g51960.1 68414.m05857 calmodulin-binding family protein contains
           IQ calmodulin-binding motif, Pfam:PF00612
          Length = 351

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 520 LCFGQEIWFFLVKEN-GIFLHHESSSDALFVL 428
           LCF  E W F   +N    LHH S+++  +V+
Sbjct: 238 LCFSDEKWKFATAQNTPRLLHHHSANNRYYVM 269


>At1g03055.2 68414.m00279 expressed protein
          Length = 200

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 420 QTHNTKRASEEDSW*RKIPFSFTRKN 497
           +T NTK AS EDS+  KI  ++  KN
Sbjct: 56  ETSNTKNASIEDSFFSKIAINYLSKN 81


>At1g03055.1 68414.m00278 expressed protein
          Length = 264

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 420 QTHNTKRASEEDSW*RKIPFSFTRKN 497
           +T NTK AS EDS+  KI  ++  KN
Sbjct: 56  ETSNTKNASIEDSFFSKIAINYLSKN 81


>At5g40820.1 68418.m04956 FAT domain-containing protein /
            phosphatidylinositol 3- and 4-kinase family protein
            similar to Atr protein [Xenopus laevis] GI:11385422;
            contains Pfam profiles PF00454 Phosphatidylinositol 3-
            and 4-kinase, PF02259 FAT domain, PF02260 FAT C domain
          Length = 2702

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -2

Query: 522  PCVSVRRFGFFW*RRMVFFFTTSPLLTPSSCCGSVL*DRHRT*SRSYYVRTLTLQV 355
            P +S RR+  +W R++  F T S +   ++C G V   RH   + +Y +  L L V
Sbjct: 1479 PSMSFRRWLSYWIRKLTAFATGSRVSIFAACRGIV---RHDMQTATYLLPYLVLDV 1531


>At5g25130.1 68418.m02977 cytochrome P450 family protein CYTOCHROME
           P450 71B1 - Thlaspi arvense, EMBL:L24438
          Length = 496

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 62  LKKAKSDTEEVIPPQAEIIEADLYKRSY 145
           LKKA+++  EVI  + +IIE D+ +  Y
Sbjct: 320 LKKAQAEVREVIKHKDDIIEEDIERLQY 347


>At1g77450.1 68414.m09019 no apical meristem (NAM) family protein
           contains Pfam PF02365: No apical meristem (NAM) domain;
           similar to GRAB1 protein GB:CAA09371, a novel member of
           the NAC domain family
          Length = 253

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 503 DLVFSGEGEWYFSSPR 456
           D+   GE EWYF SPR
Sbjct: 57  DMALYGEKEWYFFSPR 72


>At1g67500.1 68414.m07688 DNA polymerase family B protein similar to
            SP|Q61493 DNA polymerase zeta catalytic subunit (EC
            2.7.7.7) {Mus musculus}; contains Pfam profile PF00136:
            DNA polymerase family B
          Length = 1890

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 294  CLQRRSIHRVSVAWKTTSIER 356
            CLQ +S    ++ WKT+ +ER
Sbjct: 1806 CLQNKSAAAATIVWKTSKLER 1826


>At3g25420.1 68416.m03161 serine carboxypeptidase S10 family protein
           similar to serine carboxypeptidase I precursor
           (SP:P37890) from [Oryza sativa]
          Length = 505

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -2

Query: 480 RMVFFFTTSPLLTPSSCCGSVL*DRHRT*SRSYYVRTLTLQVFQCWLFS 334
           + + F + S  +     C S L  RH T S   Y R LTL  F+  +FS
Sbjct: 377 QFIIFLSISISIGNWELCSSNLEYRHDTGSMIEYHRNLTLSGFRALIFS 425


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,604,191
Number of Sequences: 28952
Number of extensions: 194585
Number of successful extensions: 435
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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