Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00083
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        25   0.97 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.7  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    24   1.7  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    24   1.7  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   5.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   6.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.9  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.1  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 433 ERKSEHDPSEVIERKDEKDK 492
           +R+  HDPS+++   +E DK
Sbjct: 354 KRQKYHDPSQLLRHVEESDK 373


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 370 LDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEG 507
           +DEY  Q     +    +S T+   E    E  ++K E+DK   EG
Sbjct: 514 IDEYVVQQMKEFDGKTLVSVTKEGLELPEDEEEKKKREEDKAKFEG 559


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 383 KNKCSMSKN--ALKRYRTQRERANTIL 457
           K+K  +S N  AL+R RTQ ERA   L
Sbjct: 76  KHKADISGNPRALRRLRTQCERAKRTL 102


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 383 KNKCSMSKN--ALKRYRTQRERANTIL 457
           K+K  +S N  AL+R RTQ ERA   L
Sbjct: 76  KHKADISGNPRALRRLRTQCERAKRTL 102


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +1

Query: 289 ARLRPPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEV 465
           AR R  +  K     K   DDD +AL  D  +++    ++   T      KSE +  ++
Sbjct: 138 ARRRLKKENKMTWEPKNKTDDDDDALVSDSDDREKDEEDKRDDTDMHGRIKSERNGKDL 196


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 296 YVPPEIRNME 325
           Y+PPE+ N+E
Sbjct: 116 YIPPEVENVE 125


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 232 FLFKCRKTLKGHMVYRKRLARL-RPPRN 312
           +LF C KT+K H+     L+ L  PP N
Sbjct: 18  YLFYCYKTIKQHIYSLISLSYLPGPPVN 45


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 232 FLFKCRKTLKGHMVYRKRLARL-RPPRN 312
           +LF C KT+K H+     L+ L  PP N
Sbjct: 18  YLFYCYKTIKQHIYSLISLSYLPGPPVN 45


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 328 QFHISYFWGDVSGPTVFYKPCG 263
           Q +I YF GD +  T+F +  G
Sbjct: 170 QRNIKYFSGDPNNVTIFGESAG 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,896
Number of Sequences: 336
Number of extensions: 3916
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)