Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00083
(830 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical pr... 31 0.77
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 30 1.8
AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine re... 30 2.3
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 30 2.3
U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 4.1
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 4.1
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 4.1
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 4.1
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.1
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.1
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 4.1
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.1
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z83233-6|CAB05763.1| 355|Caenorhabditis elegans Hypothetical pr... 28 7.1
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 7.1
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 7.1
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 7.1
AL033510-4|CAA22070.2| 343|Caenorhabditis elegans Hypothetical ... 28 7.1
Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 28 9.4
U41273-3|AAA82455.2| 257|Caenorhabditis elegans Hypothetical pr... 28 9.4
AF099917-5|AAC68783.2| 219|Caenorhabditis elegans F-box a prote... 28 9.4
>Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical
protein T08G11.4 protein.
Length = 566
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2
Query: 767 RFDEGIKLDRESWFSVT 817
R D+GI +DRE WFSVT
Sbjct: 358 RLDQGIIMDREGWFSVT 374
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/78 (21%), Positives = 35/78 (44%)
Frame = +3
Query: 483 KRQRIY*RLELGSHVESRVFERTMKVQDSCDAAEMPQDSEEQVEDNSVTQQETSXXXXXX 662
K++ + E VE E + +V+D + +M +D +E+ ED + ++
Sbjct: 157 KKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKEEEEE 216
Query: 663 XXYSRVEEDASEMPQELQ 716
+ EE+ E +E+Q
Sbjct: 217 KVEEKKEEEEEEEEEEIQ 234
>AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine
receptor, class w protein95 protein.
Length = 363
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 494 DILKVGTWEPRGKQSFRTDYESARFV 571
DI+K+G W+P +F T Y +R +
Sbjct: 188 DIVKIGDWKPMNNCTFATSYPESRVI 213
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +1
Query: 313 KKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERK-------SEHDPSEVIE 471
KK+ K F +DG++ ++ EK+ E+ + + + E++ +E P+E E
Sbjct: 213 KKFAAKWKKEFPEDGDSFGQEKGEKEGSDNEDDEEEVDEKEKEEEVKEDNAEEKPAEEPE 272
Query: 472 RKDEKDK 492
+ DEK++
Sbjct: 273 QPDEKEE 279
>U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical
protein F38B6.7 protein.
Length = 391
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 575 ITRILHFHSPFENSAFHVAPKFQPSIYPLSFSSLRSITSEGSCSLFLSV 429
+ ++ FH P NS FHV F P P S + + S S + LSV
Sbjct: 256 LKKVFLFHEPMPNSFFHVLVLFNPHGNPESMNLYYNRPSSLSREIDLSV 304
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 501 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 543
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 343 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 385
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 501 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 543
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 343 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 385
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 338 HTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKL 466
H L+ + +W ++N + L+R+R Q +N +L +L
Sbjct: 374 HELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRL 416
>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical protein
T01E8.5 protein.
Length = 1270
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Frame = +2
Query: 323 ELERKHTL-TMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANT----ILQKLLNVKMKK 487
ELE + + ++T+M S WM+ N+ + N + +RE ANT I ++++ V K
Sbjct: 1132 ELETRLLMNSLTIMFS-WMNAANRIGDAGNQILYKNWKREAANTRDPAIWRQVIRVASKL 1190
Query: 488 TKDILK 505
++ ILK
Sbjct: 1191 SQKILK 1196
>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical protein
T01E8.5 protein.
Length = 1270
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Frame = +2
Query: 323 ELERKHTL-TMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANT----ILQKLLNVKMKK 487
ELE + + ++T+M S WM+ N+ + N + +RE ANT I ++++ V K
Sbjct: 1132 ELETRLLMNSLTIMFS-WMNAANRIGDAGNQILYKNWKREAANTRDPAIWRQVIRVASKL 1190
Query: 488 TKDILK 505
++ ILK
Sbjct: 1191 SQKILK 1196
>Z83233-6|CAB05763.1| 355|Caenorhabditis elegans Hypothetical
protein K06B4.6 protein.
Length = 355
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 350 MTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQKLLNVKMK---KTKDILKVGTWE 520
M +++ +M C KN Y+T + QK LN+ MK K I+ +G +E
Sbjct: 40 MFFRRTVFKNMLFNCKYFKNCTIHYKTHPKCRACRFQKCLNIGMKAASKNDRIVSIGNYE 99
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +2
Query: 281 NGWPAYVPPEIRNMELERKHTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQ 460
N W + +R ++ + + T M + +KN+ +++ALK + A T +
Sbjct: 1331 NKWRGELDAALRENDILKSNN---TNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKE 1387
Query: 461 KLLNVKMKKTK 493
+L N +KTK
Sbjct: 1388 RLQNAFREKTK 1398
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +2
Query: 281 NGWPAYVPPEIRNMELERKHTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQ 460
N W + +R ++ + + T M + +KN+ +++ALK + A T +
Sbjct: 1404 NKWRGELDAALRENDILKSNN---TNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKE 1460
Query: 461 KLLNVKMKKTK 493
+L N +KTK
Sbjct: 1461 RLQNAFREKTK 1471
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +2
Query: 281 NGWPAYVPPEIRNMELERKHTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERANTILQ 460
N W + +R ++ + + T M + +KN+ +++ALK + A T +
Sbjct: 1404 NKWRGELDAALRENDILKSNN---TNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKE 1460
Query: 461 KLLNVKMKKTK 493
+L N +KTK
Sbjct: 1461 RLQNAFREKTK 1471
>AL033510-4|CAA22070.2| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.6 protein.
Length = 343
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -3
Query: 417 LSAFFDMLHLFFILIQIECITVIVKVCFL 331
L AF M HL + + C+ +++ +CF+
Sbjct: 194 LGAFQKMTHLKIVFTILNCVVILILLCFI 222
>Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical
protein F37D6.2c protein.
Length = 584
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 295 SGPTVFYKPCGLSMFFGI*TETHYLKCR 212
+G T+F CG + G T +HY KCR
Sbjct: 459 TGDTLFECECGFKSWNGNRTASHYHKCR 486
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 295 SGPTVFYKPCGLSMFFGI*TETHYLKCR 212
+G T+F CG + G T +HY KCR
Sbjct: 456 TGDTLFECECGFKSWNGNRTASHYHKCR 483
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 295 SGPTVFYKPCGLSMFFGI*TETHYLKCR 212
+G T+F CG + G T +HY KCR
Sbjct: 457 TGDTLFECECGFKSWNGNRTASHYHKCR 484
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 27.9 bits (59), Expect = 9.4
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Frame = +1
Query: 277 RKRLARLRPPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDP 456
R + A L PP YG +Y A + + E +SD E ++E D
Sbjct: 235 RAQSASLSPP----YGVPSPSYSFPSSVASSASSSPAPQRSSEGILDDLSDVESENEDDD 290
Query: 457 SEVIERKDEK----DKGYIEGWNLGATWKAEFSNGL 552
+ E++D K +K +EG TW ++ + L
Sbjct: 291 KKEEEKEDVKKKRQEKSIVEGELWLLTWLSQDDHNL 326
>U41273-3|AAA82455.2| 257|Caenorhabditis elegans Hypothetical
protein C26B9.3 protein.
Length = 257
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 296 YVPPEIRNMELERKHTLTMTVMHSIWMSMKNKCSMSKNALKRYRTQRERA-NTILQKLLN 472
Y+PPEI+N LE+K ++ + M ++ +A + QR A +T+ LL
Sbjct: 187 YIPPEIQNNILEKKPISMFITVYLMDMEPRSSKESYLSAFGKAILQRRMAQSTVACFLLG 246
Query: 473 VKMK 484
+ +K
Sbjct: 247 IDVK 250
>AF099917-5|AAC68783.2| 219|Caenorhabditis elegans F-box a protein
protein 24 protein.
Length = 219
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 344 LTMTVMHSIWMSMKNKCSMSKNALKRYRTQRER--ANTILQKLLNVKMKKTKDI 499
L + H+ + + N+C+ +N R RT+RER + ++ L +VK K I
Sbjct: 8 LKTVLKHTSELKISNECNEHENTRTRTRTRRERDERESFIEILKSVKCIHVKTI 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,313,895
Number of Sequences: 27780
Number of extensions: 370494
Number of successful extensions: 1699
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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