Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00081
(787 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 125 2e-28
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 125 2e-28
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 125 2e-28
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 125 2e-28
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 125 2e-28
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 125 2e-28
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 125 2e-28
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 125 2e-28
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 117 6e-26
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 50 1e-05
D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein. 30 8.2
BC044627-1|AAH44627.1| 682|Homo sapiens SCRIB protein protein. 30 8.2
BC014632-1|AAH14632.2| 832|Homo sapiens SCRIB protein protein. 30 8.2
AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein. 30 8.2
AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein. 30 8.2
AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein. 30 8.2
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 125 bits (301), Expect = 2e-28
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +1
Query: 550 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 729
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 730 VHFRDPYKFK 759
V FRDPY+FK
Sbjct: 61 VVFRDPYRFK 70
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 125 bits (301), Expect = 2e-28
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +1
Query: 550 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 729
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 730 VHFRDPYKFK 759
V FRDPY+FK
Sbjct: 61 VVFRDPYRFK 70
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 125 bits (301), Expect = 2e-28
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +1
Query: 550 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 729
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 730 VHFRDPYKFK 759
V FRDPY+FK
Sbjct: 61 VVFRDPYRFK 70
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 125 bits (301), Expect = 2e-28
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +1
Query: 550 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 729
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 730 VHFRDPYKFK 759
V FRDPY+FK
Sbjct: 61 VVFRDPYRFK 70
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 125 bits (301), Expect = 2e-28
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +1
Query: 550 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 729
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 730 VHFRDPYKFK 759
V FRDPY+FK
Sbjct: 61 VVFRDPYRFK 70
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 125 bits (301), Expect = 2e-28
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +1
Query: 550 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 729
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 730 VHFRDPYKFK 759
V FRDPY+FK
Sbjct: 61 VVFRDPYRFK 70
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 125 bits (301), Expect = 2e-28
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +1
Query: 550 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 729
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 730 VHFRDPYKFK 759
V FRDPY+FK
Sbjct: 61 VVFRDPYRFK 70
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 125 bits (301), Expect = 2e-28
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +1
Query: 550 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 729
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 730 VHFRDPYKFK 759
V FRDPY+FK
Sbjct: 61 VVFRDPYRFK 70
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 117 bits (281), Expect = 6e-26
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +1
Query: 562 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 741
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 742 DPYKFK 759
DPY+FK
Sbjct: 61 DPYRFK 66
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 50.0 bits (114), Expect = 1e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 688 DIIHDPGRGAPLAVVHFRDPYKFK 759
DIIHDPGRGAPLA V FRDPY+FK
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFK 24
>D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein.
Length = 1630
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -1
Query: 307 RAALSIIQEKLGRDKPIDEKNPYTTFGINKFADYTPEEQQSRLGLRLP 164
R A + +Q ++ R++ ++ +N T + DY+P E++ GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847
>BC044627-1|AAH44627.1| 682|Homo sapiens SCRIB protein protein.
Length = 682
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -1
Query: 307 RAALSIIQEKLGRDKPIDEKNPYTTFGINKFADYTPEEQQSRLGLRLP 164
R A + +Q ++ R++ ++ +N T + DY+P E++ GLRLP
Sbjct: 97 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 143
>BC014632-1|AAH14632.2| 832|Homo sapiens SCRIB protein protein.
Length = 832
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -1
Query: 307 RAALSIIQEKLGRDKPIDEKNPYTTFGINKFADYTPEEQQSRLGLRLP 164
R A + +Q ++ R++ ++ +N T + DY+P E++ GLRLP
Sbjct: 3 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 49
>AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein.
Length = 1630
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -1
Query: 307 RAALSIIQEKLGRDKPIDEKNPYTTFGINKFADYTPEEQQSRLGLRLP 164
R A + +Q ++ R++ ++ +N T + DY+P E++ GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847
>AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein.
Length = 1601
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -1
Query: 307 RAALSIIQEKLGRDKPIDEKNPYTTFGINKFADYTPEEQQSRLGLRLP 164
R A + +Q ++ R++ ++ +N T + DY+P E++ GLRLP
Sbjct: 772 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 818
>AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein.
Length = 1630
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -1
Query: 307 RAALSIIQEKLGRDKPIDEKNPYTTFGINKFADYTPEEQQSRLGLRLP 164
R A + +Q ++ R++ ++ +N T + DY+P E++ GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,136,057
Number of Sequences: 237096
Number of extensions: 2049706
Number of successful extensions: 4289
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4289
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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