Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00081
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 128 4e-30
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 36 0.033
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical ... 29 3.8
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 5.0
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 5.0
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 5.0
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 5.0
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 5.0
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81525-5|CAB54242.1| 168|Caenorhabditis elegans Hypothetical pr... 28 6.6
U28929-4|AAA68347.3| 338|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL117207-14|CAB60394.2| 333|Caenorhabditis elegans Hypothetical... 28 6.6
Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical p... 28 8.7
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 128 bits (309), Expect = 4e-30
Identities = 57/75 (76%), Positives = 65/75 (86%)
Frame = +1
Query: 550 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 729
MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 730 VHFRDPYKFKTGRSS 774
+ FRDPYK+KT +++
Sbjct: 61 IAFRDPYKYKTVKTT 75
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 35.9 bits (79), Expect = 0.033
Identities = 12/38 (31%), Positives = 26/38 (68%)
Frame = -2
Query: 360 FESFVKEHNREYKDDADRELHYQSFKKNLAEINQLTRR 247
FE F K++NR+YKD+++ + + +F K+ +++L +
Sbjct: 43 FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAK 80
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 238 TTFGINKFADYTPEEQQSRLGLRLPAKKT 152
T FGINKF+D + E RL +P+ T
Sbjct: 88 TQFGINKFSDLSTAEFHGRLSNVVPSNNT 116
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 526 NSAPGVVIMGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 660
NS V +GR R+ +KG F +HT K L+ LD A++
Sbjct: 456 NSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -2
Query: 360 FESFVKEHNREYKDDADRELHYQSF 286
FE F+ ++ R YKD+ +++ +Q F
Sbjct: 47 FEDFIVKYKRNYKDEIEKKFRFQQF 71
>AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2D.1 protein.
Length = 382
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 360 FESFVKEHNREYKDDADRELHYQSFKKNLAEINQLTR 250
F F K+ +R YK +A+ +L Q+F K+ + +L +
Sbjct: 44 FVEFKKKFSRTYKSEAENQLRLQNFVKSRNNVVRLNK 80
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 267 SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
S P F+ + N + ++H C + C + + TI W+ GH V ED
Sbjct: 6177 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6222
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 267 SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
S P F+ + N + ++H C + C + + TI W+ GH V ED
Sbjct: 6706 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6751
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 267 SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
S P F+ + N + ++H C + C + + TI W+ GH V ED
Sbjct: 6387 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6432
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 267 SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
S P F+ + N + ++H C + C + + TI W+ GH V ED
Sbjct: 6177 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6222
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 267 SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
S P F+ + N + ++H C + C + + TI W+ GH V ED
Sbjct: 6706 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6751
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 267 SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
S P F+ + N + ++H C + C + + TI W+ GH V ED
Sbjct: 6387 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6432
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 267 SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
S P F+ + N + ++H C + C + + TI W+ GH V ED
Sbjct: 5596 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 5641
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 661 HGYIKGVVKDIIHDPGRGAPLAVVHFR 741
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 661 HGYIKGVVKDIIHDPGRGAPLAVVHFR 741
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81525-5|CAB54242.1| 168|Caenorhabditis elegans Hypothetical
protein F33A8.7 protein.
Length = 168
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = -2
Query: 462 NFVSVAL-LIATVVMASSA-DTDPPRHYDLNQ 373
N+V V L L+ATVV+++ A DTD DLNQ
Sbjct: 7 NYVLVLLVLLATVVLSNQAQDTDVQHRKDLNQ 38
>U28929-4|AAA68347.3| 338|Caenorhabditis elegans Hypothetical
protein F09C12.6 protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 404 VSADDAITTVAINNATLTKFI-----FAQCINSGTGLLVPVLLSCRIRHQ 538
VS +AI+ ++++ + FI + C+NSG + V + L+ RHQ
Sbjct: 248 VSIPNAISILSVHFEEVVSFISKPSTYFTCVNSGINIFVYLSLNAEFRHQ 297
>AL117207-14|CAB60394.2| 333|Caenorhabditis elegans Hypothetical
protein Y60A3A.6 protein.
Length = 333
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 661 HGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTGRSSSLL 783
HG + ++H P R A L ++H + KT +S+++
Sbjct: 283 HGVFTTLTMIMVHTPYRHATLEMLHLKSKRSMKTSNNSNIM 323
>Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical
protein Y57G11C.44 protein.
Length = 155
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 598 VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 723
+S ++RK + LD+++ G K ++KDI +D + P+
Sbjct: 1 MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 390 HYDLNQAKELFES-FVKEHNREYKDDADRELHYQ 292
HYD+ QA FES + + N++++D +E + Q
Sbjct: 192 HYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,776,740
Number of Sequences: 27780
Number of extensions: 341704
Number of successful extensions: 973
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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