Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00080
         (317 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    24   0.33 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   1.4  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   3.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   3.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   4.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   7.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     19   9.5  

>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 6/20 (30%), Positives = 16/20 (80%)
 Frame = +3

Query: 186 ASLFRCARPRVAQLTDEVLK 245
           A++F C +P++ +++DE ++
Sbjct: 17  AAIFTCVKPQLTRISDEAIE 36


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 160 RYRN*PDKSLHQLRTAMHHH 101
           R RN PD S H LR+    H
Sbjct: 53  RLRNVPDNSFHFLRSLKKVH 72


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 145 PDKSLHQLRTAMHHHPPNQERAVNLSIL 62
           P +S H+L T +  +PPN   AV  S L
Sbjct: 44  PLESNHKLVTFILKNPPNLNPAVQGSSL 71


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 190 RYLGVRGLVSRNSLTKY*NSS*GTGVFEPHE 282
           RY G RG++  N + +  N+   T V++  +
Sbjct: 293 RYTGERGMMGYNEIVEAQNAGGWTTVWDDEQ 323


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 100 PPNQERAVNLSILPVSGP 47
           PPN   AV   +LPV  P
Sbjct: 351 PPNPLDAVTSGLLPVRPP 368


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +3

Query: 102 WWCMAVLSWWSDLSG 146
           WW +     W D+SG
Sbjct: 189 WWDVHSTGSWLDMSG 203


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 139 CLVNSGNERDSSLLNRR 189
           C+   GN+R   ++NR+
Sbjct: 88  CIPGDGNKRSIIVVNRK 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,507
Number of Sequences: 336
Number of extensions: 1120
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)