Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00080
         (317 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0130 - 963856-965454                                             28   1.4  
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353...    27   4.2  
05_06_0282 + 26915249-26915881                                         27   4.2  
01_06_0540 + 30084698-30086211,30086422-30086485,30086667-30086771     26   5.6  
01_06_0536 + 30068881-30070383                                         26   5.6  
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633...    26   7.4  
06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26...    25   9.7  
01_05_0440 + 22203688-22203832,22203912-22204078                       25   9.7  

>07_01_0130 - 963856-965454
          Length = 532

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 130 HQLRTAMHHHPPNQERAVNLSILPVSGPGEISR 32
           H +   +   PPN     NL +LP+ GP ++ +
Sbjct: 195 HIINFLLRPEPPNTLSVDNLGVLPIIGPAKVGK 227


>09_02_0048 -
           3532663-3533475,3534086-3534589,3534715-3535740,
           3536083-3536226,3536974-3537375,3537499-3537721,
           3537830-3542368,3542480-3542599,3543005-3543038,
           3543922-3544102,3544198-3544815,3545022-3551098,
           3551139-3551304,3551508-3551614,3552056-3552178,
           3553417-3553642
          Length = 5100

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 74  INSSFLIRWVVVHGRS*LVERFVWLIPVTN 163
           +N+S L RW ++  R  LV R + L PVT+
Sbjct: 792 VNASGLTRWALLLSRLLLVLRHMLLYPVTH 821


>05_06_0282 + 26915249-26915881
          Length = 210

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 143 RQIAPPTKNGHAPPPTESRKS 81
           RQ+APP   G+ PP T  R++
Sbjct: 156 RQLAPPPPMGNPPPNTHRRRT 176


>01_06_0540 + 30084698-30086211,30086422-30086485,30086667-30086771
          Length = 560

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 103 HPPNQERAVNLSILPVSGPGEISR 32
           HPP  E  ++  +LP+ GPG + +
Sbjct: 191 HPPGGEEVID--VLPIIGPGRVGK 212


>01_06_0536 + 30068881-30070383
          Length = 500

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 97  PNQERAVNLSILPVSGPGEISR 32
           PN   A  +++LP+ GPG + +
Sbjct: 190 PNHPSAKGINVLPIIGPGRVGK 211


>04_04_1699 +
           35462160-35462555,35463114-35463196,35463317-35463378,
           35463745-35463806,35463932-35463991,35464079-35464111,
           35464196-35464261,35464349-35464393
          Length = 268

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 131 PPTKNGHAPPPTESR 87
           PP K GH PPP   R
Sbjct: 52  PPRKRGHPPPPPPRR 66


>06_01_0026 +
           265755-265968,267319-267468,267694-267738,267786-268460,
           268779-268843,268854-269073,269163-269438,269547-269663,
           269776-269853,269930-270184,270235-270323,270403-270816
          Length = 865

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 115 AMHHHPPNQERAVNLSILPVSGPGEISRVE 26
           A + H  +  +AV+  +  VSG  E++RVE
Sbjct: 125 AQNEHVTDDGKAVSEHVTEVSGKNEVTRVE 154


>01_05_0440 + 22203688-22203832,22203912-22204078
          Length = 103

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +1

Query: 52  RTPEGLTD*QLFL--DSVGGGAWPFLVGGAICLVNSGNE 162
           R   GL D  L L  ++ GGGA   L GG+  L N G E
Sbjct: 34  RAVAGLADGVLGLMYEAQGGGAGEELTGGSDGLANDGEE 72


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,362,318
Number of Sequences: 37544
Number of extensions: 159896
Number of successful extensions: 450
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)