Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00077
(788 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 26 0.39
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.1
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 23 2.8
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 4.9
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 22 6.4
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 22 6.4
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 6.4
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 22 6.4
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 22 6.4
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.5
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 21 8.5
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 8.5
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 21 8.5
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 21 8.5
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 25.8 bits (54), Expect = 0.39
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 506 VQQISTLSWQSSSPNLTSSTPHPVTLALLTSTPSLFLLHK**GT-HLQDSPFLSVNTLLL 330
V++ S L S+P LT ++P PV++ TST S HL+DSP L +
Sbjct: 137 VEKSSKLK-NKSAPILTKTSPTPVSINNNTSTSSSASSPSVTAAPHLRDSPNYIKPQLHV 195
Query: 329 SVGLT 315
S G T
Sbjct: 196 STGST 200
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 513 ITEPVPKPQPDPSKLKGCGYRNPMGVGVTITGGWV 617
ITE P + + G RNP+ +TG WV
Sbjct: 100 ITEVAPVLPGNYANASSVGSRNPIHTSSYMTGIWV 134
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 513 ITEPVPKPQPDPSKLKGCGYRNPMGVGVTITGGWV 617
ITE P + + G RNP+ +TG WV
Sbjct: 333 ITEVAPVLPGNYANASSVGSRNPIHTSSYMTGIWV 367
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 513 ITEPVPKPQPDPSKLKGCGYRNPMGVGVTITGGWV 617
ITE P + + G RNP+ +TG WV
Sbjct: 333 ITEVAPVLPGNYANASSVGSRNPIHTSSYMTGIWV 367
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 23.0 bits (47), Expect = 2.8
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 519 EPVPKPQPDPSK 554
EPVP P+P P++
Sbjct: 394 EPVPTPEPQPTQ 405
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 510 PITEPVPKPQPDPSKLKGCGYRNPMGVG 593
P+T P P P P + GY +PM G
Sbjct: 116 PLT-PSPGPPSHPYTVISNGYSSPMSSG 142
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -1
Query: 605 GDGHSDPHGVPVAASLQLRGVRL 537
G GH D P LQ G+RL
Sbjct: 153 GSGHQDSRTSPSGQHLQELGLRL 175
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -1
Query: 605 GDGHSDPHGVPVAASLQLRGVRL 537
G GH D P LQ G+RL
Sbjct: 153 GSGHQDSRTSPSGQHLQELGLRL 175
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 273 GGVPKMSEARQGLRSCPG 220
G P +S+ARQ L + PG
Sbjct: 382 GAAPAVSKARQFLPALPG 399
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 273 GGVPKMSEARQGLRSCPG 220
G P +S+ARQ L + PG
Sbjct: 207 GAAPAVSKARQFLPALPG 224
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -1
Query: 605 GDGHSDPHGVPVAASLQLRGVRL 537
G GH D P LQ G+RL
Sbjct: 153 GSGHQDSRTSPSGQHLQELGLRL 175
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 361 ESCKCVPYYLCNK 399
+ C YYLCN+
Sbjct: 2245 DDTNCAQYYLCNQ 2257
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +2
Query: 338 ACLRIRTGNLANASPTIC 391
+C+ + G+ N++P+IC
Sbjct: 21 SCIAVGVGSGRNSAPSIC 38
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1
Query: 494 STLSWQSSSPNLTSSTPHP 438
S LS ++PN +S++P+P
Sbjct: 56 SLLSPSGNTPNKSSTSPYP 74
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 678 VRWSRSPDTSSSRHDWRSHRL 740
V+ R PD S R W+S R+
Sbjct: 35 VQGVRGPDFRSLRFSWKSARV 55
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 678 VRWSRSPDTSSSRHDWRSHRL 740
V+ R PD S R W+S R+
Sbjct: 35 VQGVRGPDFRSLRFSWKSARV 55
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,360
Number of Sequences: 336
Number of extensions: 4501
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -