Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00077
(788 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 1.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 1.1
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 1.9
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 23 2.4
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 23 2.4
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 23 2.4
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 2.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.3
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 5.7
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 22 5.7
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 5.7
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 7.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 7.5
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 713 T*GCIRTPTPAYDSFKASSRATTQGTRRTEPPYPPSGDGHSDP 585
T GC +P PA S K+ S Q ++ P S + SDP
Sbjct: 1748 TEGCA-SPPPAATSMKSVSSRRRQQRKQQTPGDVESDESESDP 1789
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 713 T*GCIRTPTPAYDSFKASSRATTQGTRRTEPPYPPSGDGHSDP 585
T GC +P PA S K+ S Q ++ P S + SDP
Sbjct: 1744 TEGCA-SPPPAATSMKSVSSRRRQQRKQQTPGDVESDESESDP 1785
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.8 bits (49), Expect = 1.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 521 FRYGIVQQISTLSWQSSSPNLTSSTPH 441
F IV + S S +S SP+L +S PH
Sbjct: 28 FSSSIVDRRSPSSSRSPSPSLLTSQPH 54
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 304 PGSPCRLRRRGG 269
PG+PC+L RR G
Sbjct: 184 PGTPCQLTRRQG 195
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 304 PGSPCRLRRRGG 269
PG+PC+L RR G
Sbjct: 184 PGTPCQLTRRQG 195
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 304 PGSPCRLRRRGG 269
PG+PC+L RR G
Sbjct: 184 PGTPCQLTRRQG 195
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -2
Query: 211 TVTSTASKSERIALLLLKHSEKENRQNFTSLYYENYALISTLSLFL 74
TVT+ + I ++L+ H ++ + Y +Y ISTL L
Sbjct: 143 TVTTILAAIVGIVMVLIIHPGDPRIKSVVTAYKADYTKISTLDAIL 188
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = -1
Query: 662 SSRATTQGTRRTEPPYPPSGDGHSDPHGVP 573
S + Q +R PP P G P G P
Sbjct: 26 SPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 157 HSEKENRQNFTSLYYENYAL 98
H E + +QN SL EN+ +
Sbjct: 34 HQEMQGKQNSASLNSENFGI 53
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 157 HSEKENRQNFTSLYYENYAL 98
H E + +QN SL EN+ +
Sbjct: 34 HQEMQGKQNSASLNSENFGI 53
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 157 HSEKENRQNFTSLYYENYAL 98
H E + +QN SL EN+ +
Sbjct: 34 HQEMQGKQNSASLNSENFGI 53
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -1
Query: 617 YPPSGDGHSDPHGVPVAASL--QLRGVRLRLWHG 522
Y P + H D +GVP L G+ +W G
Sbjct: 197 YTPLKEDHDDHYGVPTLEELGFDTEGLLPPVWVG 230
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.8 bits (44), Expect = 7.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 242 CLASDIFGTPPTPAKPA 292
CL + + G TP KPA
Sbjct: 326 CLVNIVLGDSDTPPKPA 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,454
Number of Sequences: 438
Number of extensions: 5207
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -