Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00076
(738 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 178 1e-43
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 80 6e-14
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 77 3e-13
UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 75 2e-12
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 67 5e-10
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 67 5e-10
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 64 3e-09
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 62 1e-08
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 56 7e-07
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 50 8e-05
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 48 2e-04
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 44 0.004
UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and c... 43 0.007
UniRef50_Q6IH44 Cluster: HDC03386; n=1; Drosophila melanogaster|... 43 0.009
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 42 0.016
UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Re... 42 0.016
UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_Q00068 Cluster: Reverse transcriptase; n=2; Ascobolus i... 42 0.021
UniRef50_UPI0000E477B8 Cluster: PREDICTED: similar to endonuclea... 40 0.084
UniRef50_UPI00006CD1CA Cluster: hypothetical protein TTHERM_0012... 40 0.084
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 39 0.11
UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1 retr... 39 0.11
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 38 0.19
UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gamb... 38 0.26
UniRef50_A7SMU7 Cluster: Predicted protein; n=10; Nematostella v... 38 0.34
UniRef50_UPI0000E482C4 Cluster: PREDICTED: similar to endonuclea... 37 0.59
UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like p... 36 0.78
UniRef50_UPI0000E487CB Cluster: PREDICTED: similar to endonuclea... 36 0.78
UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1... 36 0.78
UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1 r... 36 1.4
UniRef50_UPI0000E46F21 Cluster: PREDICTED: similar to endonuclea... 36 1.4
UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-direct... 36 1.4
UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 36 1.4
UniRef50_UPI00015B4866 Cluster: PREDICTED: similar to ENSANGP000... 35 1.8
UniRef50_UPI000058923D Cluster: PREDICTED: similar to endonuclea... 35 1.8
UniRef50_Q39P91 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 35 1.8
UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6... 35 1.8
UniRef50_UPI00015B46F3 Cluster: PREDICTED: similar to reverse tr... 34 3.2
UniRef50_A6C543 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2... 34 4.2
UniRef50_A4JW79 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_Q03272 Cluster: Retrovirus-related Pol polyprotein from... 33 5.5
UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from... 33 5.5
UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetic... 33 7.3
UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles g... 33 7.3
UniRef50_O44147 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_UPI00015B6048 Cluster: PREDICTED: similar to ENSANGP000... 33 9.7
UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like p... 33 9.7
UniRef50_UPI0000E47234 Cluster: PREDICTED: hypothetical protein;... 33 9.7
UniRef50_A7SR43 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.7
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 178 bits (434), Expect = 1e-43
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKA 434
VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK+MKS SERYFDKA
Sbjct: 828 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKHMKSVSERYFDKA 887
Query: 435 MRHDNRLIVADADYSPNPDHAGASH 509
MRHDNRLIVA ADYSPNPDHAGASH
Sbjct: 888 MRHDNRLIVAAADYSPNPDHAGASH 912
Score = 169 bits (411), Expect = 6e-41
Identities = 80/85 (94%), Positives = 81/85 (95%)
Frame = +1
Query: 1 RRRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 180
RRRN TPPITLF PIPWARKVKYLGVTLDASMTFRPHIK+VRDRAAFILGRLYPMICKR
Sbjct: 743 RRRNITPPITLFGLPIPWARKVKYLGVTLDASMTFRPHIKTVRDRAAFILGRLYPMICKR 802
Query: 181 SKMSLRNKVTL*KTCIRPVMTYASV 255
SKMSLRNKVTL KTCIRPVMTYASV
Sbjct: 803 SKMSLRNKVTLYKTCIRPVMTYASV 827
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +2
Query: 524 HVLTDPSDPITFALDAXXSNT 586
HVLTDPSDPIT ALD SNT
Sbjct: 918 HVLTDPSDPITLALDTFSSNT 938
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +1
Query: 4 RRNFTPP--ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICK 177
RR +P + +F IPW+ +VKYLGV LD ++F PH+ + G L ++C+
Sbjct: 1195 RRRVSPDGFVRMFNADIPWSDQVKYLGVILDKKLSFGPHLDYALAKGKMATGMLRSLVCR 1254
Query: 178 RSKMSLRNKVTL*KTCIRPVMTYASVCSLTRPAHT 282
RS +S+ NK+ L K+ IRP MTYASV P T
Sbjct: 1255 RSALSIDNKLLLYKSVIRPTMTYASVAWAFAPCKT 1289
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +3
Query: 273 RTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMK-SASE 416
+T + LQ+ Q++F R A APWFVRN LH ++ + ++ ++ + +ASE
Sbjct: 1288 KTRMHKLQTFQNKFLRQAFNAPWFVRNNQLHREVKMPTMEEFFRETASE 1336
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +3
Query: 255 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKA 434
VFAH ++ + LQ Q+R R G PW++R VDLH +L + SI Y+KS + YF+KA
Sbjct: 39 VFAHMSKDNFHKLQVFQNRVLRKVTGTPWYIRRVDLHRNLEIPSIWTYVKSLTISYFEKA 98
Query: 435 MRHDNRLIVADADYSPNPDHA 497
H + L+V+ A+Y P P+ A
Sbjct: 99 ANHPSPLVVSAANYQPVPNAA 119
Score = 56.8 bits (131), Expect = 5e-07
Identities = 23/35 (65%), Positives = 32/35 (91%)
Frame = +1
Query: 145 ILGRLYPMICKRSKMSLRNKVTL*KTCIRPVMTYA 249
+LGRL+P++C +SKMSLR+K+ L KTCIRPV+TY+
Sbjct: 2 VLGRLHPLLCHKSKMSLRHKLILYKTCIRPVITYS 36
>UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 421
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/86 (40%), Positives = 49/86 (56%)
Frame = +1
Query: 25 ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNK 204
+ +F IPW+ VKYLGV LD ++F PH+ + G L ++C+RS +S+ NK
Sbjct: 295 VRMFNADIPWSDHVKYLGVILDKKLSFGPHLDYALAKGKMATGMLRSLVCRRSALSIDNK 354
Query: 205 VTL*KTCIRPVMTYASVCSLTRPAHT 282
+ L K+ IRP MTYA V P T
Sbjct: 355 LLLYKSVIRPTMTYAPVAWAFAPYKT 380
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/86 (32%), Positives = 54/86 (62%)
Frame = +1
Query: 1 RRRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 180
RR + I + Q I W +++KY+G+TLD S+T++ H+ + ++ L L ++C++
Sbjct: 319 RRASQHQNILINNQAIEWIKQIKYMGLTLDTSLTYKTHLINAANKTKSALKSLNSLLCRK 378
Query: 181 SKMSLRNKVTL*KTCIRPVMTYASVC 258
+ ++L NK L + +RP+++YAS C
Sbjct: 379 THLNLANKRLLYLSTLRPILSYASPC 404
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/70 (24%), Positives = 40/70 (57%)
Frame = +3
Query: 267 AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHD 446
AA +++ + ++Q++ R APWF+RN +L DL + +++ ++K ++ + ++ +
Sbjct: 408 AASSNLSHILTVQNKIIRQISNAPWFIRNKNLEKDLKIPNLKDFIKKLNQDFANRTGTSN 467
Query: 447 NRLIVADADY 476
N + DY
Sbjct: 468 NPSLTYTIDY 477
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein;
n=80; Culicimorpha|Rep: Reverse transcriptase homolog
protein - Chironomus thummi
Length = 883
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = +1
Query: 25 ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNK 204
I + I W + KYLG+ +D +T +PH++ V +RA L +LYP+I + ++ +RNK
Sbjct: 740 IKFLNENIKWETEAKYLGMVIDNRVTLKPHVEYVTNRAHTALRQLYPLISRNLQLDVRNK 799
Query: 205 VTL*KTCIRPVMTY 246
+ + K IRP+ TY
Sbjct: 800 LLIYKLAIRPIFTY 813
Score = 36.7 bits (81), Expect = 0.59
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 258 FAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR-KYMKSASE 416
F A+TH+ LQ LQ++F R+ + + R DLH + + SI K ASE
Sbjct: 818 FGSMAKTHLQKLQVLQNKFLRIVLNKTRYERITDLHTEAKIPSIEGSRRKVASE 871
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:
ORF1 - Drosophila melanogaster (Fruit fly)
Length = 884
Score = 64.5 bits (150), Expect = 3e-09
Identities = 26/76 (34%), Positives = 45/76 (59%)
Frame = +1
Query: 25 ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNK 204
+ + PI W ++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK
Sbjct: 757 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNK 816
Query: 205 VTL*KTCIRPVMTYAS 252
+ + KT P++ Y S
Sbjct: 817 IIIFKTIFNPILMYGS 832
Score = 32.7 bits (71), Expect = 9.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 255 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 395
V+ A+THI LQ Q++ +L + P++ LH G++ +++
Sbjct: 834 VWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 880
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +1
Query: 4 RRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 183
+R PP+ + P+P KYLGV LD +TF H+ +R R + + Y ++ RS
Sbjct: 725 KRRTPPPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRS 784
Query: 184 KMSLRNKVTL*KTCIRPVMTY 246
K+SL NK+T+ K + P Y
Sbjct: 785 KLSLSNKLTIYKQILAPNWKY 805
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +3
Query: 255 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKA 434
++ A +HI +Q++Q++ RL G WFVRN LH DL L ++ + S RY D+
Sbjct: 809 IWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRL 868
Query: 435 MRHDNRLIVA 464
RH NRL A
Sbjct: 869 ERHRNRLASA 878
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 56.4 bits (130), Expect = 7e-07
Identities = 23/67 (34%), Positives = 42/67 (62%)
Frame = +3
Query: 255 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKA 434
++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ + + + +Y +K
Sbjct: 800 LWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKL 859
Query: 435 MRHDNRL 455
H N L
Sbjct: 860 TTHTNPL 866
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/78 (37%), Positives = 42/78 (53%)
Frame = +1
Query: 19 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 198
PP+ L IP A +V YLGV LD +T+R HI++ L+ +I RS +SL
Sbjct: 721 PPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLE 780
Query: 199 NKVTL*KTCIRPVMTYAS 252
K L + ++P+ TY S
Sbjct: 781 FKALLYNSVLKPIWTYGS 798
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 49.6 bits (113), Expect = 8e-05
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +1
Query: 16 TPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSL 195
T PI L + + KYLG+TLD +TF PH+K+ R + +L ++ ++S M+L
Sbjct: 735 TAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTL 794
Query: 196 RNKVTL*KTCIRPVMTY 246
R K + C+ P+ Y
Sbjct: 795 RAKRAVYVHCVAPIWLY 811
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = +3
Query: 255 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKA 434
++ AA+++ + +Q LQ+R R P++VR LH DL L ++ + + + RY D+
Sbjct: 815 IWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRL 874
Query: 435 MRHDNRL 455
RH + L
Sbjct: 875 RRHHSIL 881
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +1
Query: 4 RRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 183
R P ++L + I + KYLG+TLD +TF HI +++ + R+ +I R+
Sbjct: 730 RTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRN 789
Query: 184 KMSLRNKVTL*KTCIRPVMTY 246
K+SL KV + K+ + P + Y
Sbjct: 790 KLSLGCKVNIYKSILAPCLFY 810
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/67 (28%), Positives = 41/67 (61%)
Frame = +3
Query: 255 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKA 434
V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + + +++ +++Y ++
Sbjct: 814 VYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERL 873
Query: 435 MRHDNRL 455
H N L
Sbjct: 874 NVHPNSL 880
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 44.0 bits (99), Expect = 0.004
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +1
Query: 4 RRNFTPP--ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICK 177
+RN TP I + + W+ KYLGVTLD +++ H K +A +L P
Sbjct: 1051 KRNTTPHTCIQIKGHTLKWSNSAKYLGVTLDRKLSWVKHTKLTLSKALGAFIQLRPFFNN 1110
Query: 178 RSKMSLRNKVTL*KTCIRPVMTYA 249
+S +S + K+ IR + TYA
Sbjct: 1111 KS-VSYKTKLRAFSAIIRSIQTYA 1133
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +3
Query: 255 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKA 434
V+ A +H+ ++ R R + PW++RN + ++ + S + + + D
Sbjct: 1136 VWGAAGESHLKPIEGSFFRMLRSILDIPWYIRNKQILKEVAITSPNQAAPIFAAKLHDSM 1195
Query: 435 MRHDNRLIVADADYS 479
H N IVA Y+
Sbjct: 1196 KNHCNPTIVATTTYT 1210
>UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and
camp-inhibited cgmp 3,5-cyclic phosphodiesterase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase
- Strongylocentrotus purpuratus
Length = 1197
Score = 43.2 bits (97), Expect = 0.007
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 RRRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 180
+ R P + L QP+ +K LGV + A++ + HI V RA GR MIC+
Sbjct: 946 KNRANPPSLHLNNQPMEDTNCLKLLGVLIQANLKWDSHISDVVSRA----GRRIFMICRL 1001
Query: 181 SKMS--LRNKVTL*KTCIRPVMTYAS 252
K S + + V + T IRP++ YAS
Sbjct: 1002 RKASVPMHDLVNIYSTYIRPLLEYAS 1027
>UniRef50_Q6IH44 Cluster: HDC03386; n=1; Drosophila
melanogaster|Rep: HDC03386 - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +1
Query: 19 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSK 186
PP+TL I YLG+TLD +T+ PHI R +A L +L+ +I K+SK
Sbjct: 19 PPVTLDGDTITTTSTPNYLGLTLDRRLTWGPHINRKRIQANIRLKQLHWLIGKKSK 74
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 41.9 bits (94), Expect = 0.016
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 25 ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMI 171
+ +F IPW+ +VKYLGV LD ++F PH+ + G L ++
Sbjct: 752 VRMFNADIPWSDQVKYLGVILDKKLSFGPHLDYALAKGKMATGMLRSIV 800
>UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1092
Score = 41.9 bits (94), Expect = 0.016
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +1
Query: 40 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*K 219
Q I K YLGVTLD+ +T H+ + + + +L ++ RSK+ + K+ + K
Sbjct: 801 QTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILK 860
Query: 220 TCIRPVMTYA 249
+ + P+ YA
Sbjct: 861 SVLSPIWQYA 870
>UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 474
Score = 41.9 bits (94), Expect = 0.016
Identities = 27/90 (30%), Positives = 45/90 (50%)
Frame = +1
Query: 1 RRRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 180
R N +TL I + V+YLGV LD S+ ++ H+K V ++A+ +L L +
Sbjct: 31 RSYNMEQTVTLGDTTIRPSDGVRYLGVQLDRSLRWKQHLKHVEEKASSVLAALGAIAAST 90
Query: 181 SKMSLRNKVTL*KTCIRPVMTYASVCSLTR 270
SL + + + + P++TY CS R
Sbjct: 91 WGSSLISLRQVYLSIVLPIITYG--CSAAR 118
>UniRef50_Q00068 Cluster: Reverse transcriptase; n=2; Ascobolus
immersus|Rep: Reverse transcriptase - Ascobolus immersus
Length = 746
Score = 41.5 bits (93), Expect = 0.021
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +1
Query: 40 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*K 219
+P+P V++LG+ LD ++FRPH+++ A L L + ++L N L +
Sbjct: 385 RPLP---SVRWLGILLDRKLSFRPHVENRIAAAGRALSSLLRLSTTEKGLTLSNMRQLYQ 441
Query: 220 TCIRPVMTYAS 252
CI PV+ + S
Sbjct: 442 ACILPVIDFGS 452
>UniRef50_UPI0000E477B8 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 467
Score = 39.5 bits (88), Expect = 0.084
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +1
Query: 40 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKV--TL 213
Q +P + KYLGVT+ + + H++++R +A+ +G I +R+ S KV T
Sbjct: 260 QVLPQKKTYKYLGVTVRDDLRWNTHVEALRSKASRTMG-----ILRRNLGSCSKKVRETA 314
Query: 214 *KTCIRPVMTYAS 252
KT +RP + Y+S
Sbjct: 315 YKTLVRPQLEYSS 327
>UniRef50_UPI00006CD1CA Cluster: hypothetical protein
TTHERM_00129610; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00129610 - Tetrahymena
thermophila SB210
Length = 835
Score = 39.5 bits (88), Expect = 0.084
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +1
Query: 46 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*KTC 225
IP + KYLG+ +D + T PH+K + R ++ LY + ++ +N+ + T
Sbjct: 616 IPIVNQYKYLGINIDGNGTIAPHLKFIEQRWKYLQKALYFI----RDLTFKNQALMWSTF 671
Query: 226 IRPVMTYASVC 258
++P Y S+C
Sbjct: 672 VKPYFQY-SLC 681
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1103
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +1
Query: 13 FTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMS 192
+TPP+ + Q K +YLG+ LD +TF H+ ++ + +L +I K S +
Sbjct: 792 YTPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLP 850
Query: 193 LRNKVTL*KTCIRPVMTYA 249
K+ L K + P+ YA
Sbjct: 851 KNAKILLWKQIVSPIWHYA 869
Score = 36.3 bits (80), Expect = 0.78
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +3
Query: 276 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRL 455
T +Q++++++ R + A + R D+ ++S + AS+RY + H+N L
Sbjct: 880 TQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPL 939
Query: 456 I 458
I
Sbjct: 940 I 940
>UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1
retrotransposable element R1DM; n=13; Drosophila|Rep:
Putative 115 kDa protein in type-1 retrotransposable
element R1DM - Drosophila melanogaster (Fruit fly)
Length = 1021
Score = 39.1 bits (87), Expect = 0.11
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 19 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 159
P + + +P+ R +YLG+T+ M F HI S+R R ++G L
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGAL 765
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 38.3 bits (85), Expect = 0.19
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 19 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDR 135
P + + ++ IP + K+LG+TLD+ F PHIK ++ +
Sbjct: 720 PELFIHKKKIPVVKTTKFLGLTLDSKFNFLPHIKELKKK 758
>UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000028649 - Anopheles gambiae
str. PEST
Length = 158
Score = 37.9 bits (84), Expect = 0.26
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS-KMSLRNKVTL*KTCIRPVM 240
VK LGV LD +TF HI SV ++A LG L + C S M L+ TL + +R ++
Sbjct: 51 VKDLGVLLDRGLTFSHHIDSVVNQARKTLGLLKKIACDFSDPMCLK---TLFCSLVRSIL 107
Query: 241 TYASV 255
Y SV
Sbjct: 108 EYCSV 112
>UniRef50_A7SMU7 Cluster: Predicted protein; n=10; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 205
Score = 37.5 bits (83), Expect = 0.34
Identities = 20/65 (30%), Positives = 38/65 (58%)
Frame = +1
Query: 61 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*KTCIRPVM 240
KVK LG+ LD S+T+ H+K + ++ + LG L K+ +SL+ + + I+P++
Sbjct: 80 KVKLLGIRLDNSLTWDNHLKYIHNKNSKRLGLLKR---KKKFLSLKARTLFYHSLIQPIL 136
Query: 241 TYASV 255
Y ++
Sbjct: 137 DYGAI 141
>UniRef50_UPI0000E482C4 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 496
Score = 36.7 bits (81), Expect = 0.59
Identities = 25/94 (26%), Positives = 49/94 (52%)
Frame = +1
Query: 1 RRRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 180
RR+ T TL P+ ++YLG+T ++++++ H+ ++ A +LG + + K
Sbjct: 268 RRKAITTTYTLGDTPLALVTDLRYLGLTFSSNLSWQGHMNNITSLANRMLGLVSRNLHKT 327
Query: 181 SKMSLRNKVTL*KTCIRPVMTYASVCSLTRPAHT 282
S+ +R + + +RP + Y CS+ P HT
Sbjct: 328 SQ-KIRQQAYF--SLVRPHLEYC--CSVWNP-HT 355
>UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 1050
Score = 36.3 bits (80), Expect = 0.78
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +1
Query: 4 RRNFTP---PITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 141
RRN P I + Q I + VK+LG+T D + F+ H K+V+++A+
Sbjct: 734 RRNIEPGKTEIKIKNQSIKSSATVKFLGITFDYRLNFKEHTKNVKNKAS 782
>UniRef50_UPI0000E487CB Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1060
Score = 36.3 bits (80), Expect = 0.78
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 46 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMI--CKRSKMSLRNKVTL*K 219
IP ++ KYLGVT+ A + + H +++R +A+ LG L + C R S R L
Sbjct: 847 IPRVKEYKYLGVTVAADLRWNKHCQTIRHKASRTLGLLRRTLSPCTRDVKS-RAYTAL-- 903
Query: 220 TCIRPVMTYAS 252
+RP + YAS
Sbjct: 904 --VRPQLEYAS 912
>UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1;
Schistosoma mansoni|Rep: Endonuclease-reverse
transcriptase - Schistosoma mansoni (Blood fluke)
Length = 1067
Score = 36.3 bits (80), Expect = 0.78
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 25 ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNK 204
+TL + P+ V LGV S+ F HI + + +LG + R+ K
Sbjct: 838 LTLNKNPLLRLTSVTDLGVHYSDSLNFSEHISTKASQMRRLLGFIL-----RNFFQKETK 892
Query: 205 VTL*KTCIRPVMTYASVCS 261
+ L K C+RP++ Y S S
Sbjct: 893 IILYKACVRPIVEYCSFLS 911
>UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 492
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 43 PIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 138
P+ ++VKYLGVTLDA + + HIK ++A
Sbjct: 122 PLKLVKEVKYLGVTLDAKLNWGKHIKDKCEKA 153
>UniRef50_UPI0000E46F21 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 561
Score = 35.5 bits (78), Expect = 1.4
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = +1
Query: 67 KYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*KTCIRPVMTY 246
K LGVT D S+ F H+ + +A ILG L + SL V L KT +RP + Y
Sbjct: 383 KDLGVTFDPSLKFSLHVGKITAKANSILGLLKRNFHHLDEKSL---VLLYKTLVRPKLEY 439
Query: 247 AS 252
S
Sbjct: 440 CS 441
>UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 932
Score = 35.5 bits (78), Expect = 1.4
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 1 RRRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSV---RDRAAFILGRLYP 165
RRR +L + I +KYLGV LD + F PH++ V +R L RL P
Sbjct: 635 RRRPREIKFSLMGEDISPQTSIKYLGVRLDKELRFAPHVEEVAAKAERTMAALSRLMP 692
>UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1201
Score = 35.5 bits (78), Expect = 1.4
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +1
Query: 46 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 150
+P++R +KYLGV + A +++ PH+K + +A I+
Sbjct: 800 VPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>UniRef50_UPI00015B4866 Cluster: PREDICTED: similar to
ENSANGP00000022132; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022132 - Nasonia
vitripennis
Length = 1107
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*KTC 225
+ + V+ LGV D+ +T++ H+ + RA ++ RLY K + LR + +
Sbjct: 850 VDFESSVRSLGVVRDSKLTWKEHVTRMCKRAHSLMYRLY-FFRKSKNLGLRKHLV--QAL 906
Query: 226 IRPVMTYASV--CSLTR 270
+ P++ Y S+ C+LT+
Sbjct: 907 LFPIIDYCSLVYCNLTQ 923
>UniRef50_UPI000058923D Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 289
Score = 35.1 bits (77), Expect = 1.8
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 28 TLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKV 207
T QP+ YLGV +D + + H + +A +LG L + +K + K
Sbjct: 133 TFCGQPLQEVSSYPYLGVEIDNKLRWDTHFTKLTSKANKVLGFLRKNLWFCTKAT---KE 189
Query: 208 TL*KTCIRPVMTYAS 252
+ KT +RP++ YAS
Sbjct: 190 SAYKTLVRPILEYAS 204
>UniRef50_Q39P91 Cluster: Putative uncharacterized protein; n=1;
Burkholderia sp. 383|Rep: Putative uncharacterized
protein - Burkholderia sp. (strain 383) (Burkholderia
cepacia (strain ATCC 17760/ NCIB 9086 / R18194))
Length = 478
Score = 35.1 bits (77), Expect = 1.8
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Frame = +3
Query: 267 AARTHIDTL--QSLQSR-FCRLAVG-APWFVRNVDLHDDLG---LESIRK---YMKSASE 416
AA + +D L ++L R F LA G APWF R + +++G E +RK M+ A
Sbjct: 385 AAESIVDNLALRALHERVFSTLAAGGAPWFARLLRQPEEIGDLTAEGLRKMPALMRGADG 444
Query: 417 RYFDKAMRHDNRLIVADAD-YSPNPDHAGASHV 512
R RH N +I A D PD G HV
Sbjct: 445 RSLTLTRRHINLVIKAARDAMFGQPDPKGDKHV 477
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 35.1 bits (77), Expect = 1.8
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 198
P + + IP + +K LGVT+D +TF H+ +V RA + +L R+ L
Sbjct: 1208 PRLNMGGTVIPMSEDIKILGVTVDNKLTFNAHVSNVCRRAIEVYKQL--ARAARASWGLH 1265
Query: 199 NKV--TL*KTCIRPVMTYAS 252
+V + I P++ YA+
Sbjct: 1266 PEVIKLIYTATIEPIVLYAA 1285
>UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6;
Bilateria|Rep: Endonuclease/reverse transcriptase -
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Length = 1045
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKM-SLRNKVTL*KTCIRPV 237
+VKYLG+TL + + PH+ ++ ++A R + I + K+ S+ + K +RP
Sbjct: 847 QVKYLGITLTRDLKWSPHVTNITNKA----NRSFGFIRRNIKVNSIAIREVAYKALVRPT 902
Query: 238 MTYAS 252
+ Y+S
Sbjct: 903 LEYSS 907
>UniRef50_UPI00015B46F3 Cluster: PREDICTED: similar to reverse
transcriptase-like protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to reverse
transcriptase-like protein - Nasonia vitripennis
Length = 745
Score = 34.3 bits (75), Expect = 3.2
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +1
Query: 46 IPWARKVKYLGVTLDASMTFRPHIKSVRDRA 138
+P++ VK LGV +D+ ++++PH++ + RA
Sbjct: 388 VPFSNTVKNLGVVMDSKLSWKPHVECITKRA 418
>UniRef50_A6C543 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 1247
Score = 33.9 bits (74), Expect = 4.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 354 VDLHDDLGLESIR-KYMKSASERYFDKAMRHDNRLIVADADYSPNP 488
V +HDDLG+E + +Y KS+S+ +A+R D + P P
Sbjct: 442 VVVHDDLGIEDVLIRYQKSSSQETLSRALRTDRENFSFRLPFPPEP 487
>UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2;
Schistosoma|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 831
Score = 33.9 bits (74), Expect = 4.2
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +1
Query: 13 FTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMS 192
+ P + L + + V LG+ S+ F+ H + +A ++G + ++ +
Sbjct: 707 YEPQLYLNKSKVQTLNSVHDLGINYTGSLNFKAHASFIISKARRLIGFI-----TKNFFT 761
Query: 193 LRNKVTL*KTCIRPVMTYAS 252
K+TL K C+RP + Y S
Sbjct: 762 TDAKLTLYKICVRPSLEYCS 781
>UniRef50_A4JW79 Cluster: Putative uncharacterized protein; n=1;
Burkholderia vietnamiensis G4|Rep: Putative
uncharacterized protein - Burkholderia vietnamiensis
(strain G4 / LMG 22486) (Burkholderiacepacia (strain
R1808))
Length = 129
Score = 33.5 bits (73), Expect = 5.5
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 192 PSEQGDTLKNLHKARHDLRECVFAHAARTHIDTLQSLQSRFCRLAVGAP 338
PS G N HD+ FA AR++ +Q++ F +L VGAP
Sbjct: 56 PSPNGSIAMNAWPGWHDVALRRFADTARSYRPNIQTVTQSFAQLVVGAP 104
>UniRef50_Q03272 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 4
(Retrovirus-related Pol polyprotein from type I
retrotransposable element R1 4) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease]; n=1; Nasonia
vitripennis|Rep: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 4
(Retrovirus-related Pol polyprotein from type I
retrotransposable element R1 4) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease] - Nasonia
vitripennis (Parasitic wasp)
Length = 392
Score = 33.5 bits (73), Expect = 5.5
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +1
Query: 25 ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNK 204
I L + I + + V+YLGV DA++ H K +R++ + L + + + +
Sbjct: 78 IELGGKSISFEQSVRYLGVHFDANLGISAHCKYLREKLVPLFSDLRKLAQCQWGLGHKAL 137
Query: 205 VTL*KTCIRPVMTYASVCSLTRPAHT 282
T+ K P + YAS AHT
Sbjct: 138 ETIYKGVFVPTVCYASARWYKEGAHT 163
>UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 (Retrovirus-related
Pol polyprotein from type I retrotransposable element
R1) [Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease]; n=1; Bradysia coprophila|Rep:
Retrovirus-related Pol polyprotein from type-1
retrotransposable element R1 (Retrovirus-related Pol
polyprotein from type I retrotransposable element R1)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Sciara coprophila (Fungus gnat)
Length = 1004
Score = 33.5 bits (73), Expect = 5.5
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +1
Query: 10 NFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKM 189
N P I L I + +VK+LG+ + M FRPH +R + ++G L ++ K +
Sbjct: 692 NRPPCIRLNGTSISYKSEVKHLGIFVAERMNFRPHFVYLRGKILGLVGCLRRVMRKSWGL 751
Query: 190 SLRNKVTL*KTCIRPVMTYAS 252
R L K M+Y +
Sbjct: 752 GRRATCILYKGLFVACMSYGA 772
>UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=6; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1057
Score = 33.1 bits (72), Expect = 7.3
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 58 RKVKYLGVTLDASMTFRPHIKSVRDRA---AFILGRLYPMI 171
+ V+YLGV ++ MTF H+ V +A A +LGRL P +
Sbjct: 642 QNVRYLGVDINQRMTFTSHVMRVAAKAEKMAAMLGRLMPNV 682
>UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1022
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 55 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 183
+R +KYLG+ +D + + HIK V +RA L M+ RS
Sbjct: 711 SRHLKYLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRS 753
>UniRef50_O44147 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 389
Score = 33.1 bits (72), Expect = 7.3
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +1
Query: 43 PIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*KT 222
PI + + LG+ D+ +TF+PHIK + + L R ++ + L KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244
Query: 223 CIRPVMTYASVCSLTRPA 276
I P++ Y S +P+
Sbjct: 245 YILPLIEYGSAVYSPKPS 262
>UniRef50_UPI00015B6048 Cluster: PREDICTED: similar to
ENSANGP00000012343; n=2; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000012343 - Nasonia
vitripennis
Length = 804
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 58 RKVKYLGVTLDASMTFRPHIKSVRDRA 138
++VKYLGVTLDA + + HIK ++A
Sbjct: 189 KEVKYLGVTLDARLNWGKHIKDKCEKA 215
>UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 963
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 7 RNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 138
RN T I + + +VK+LGV D+ + + PHI ++ RA
Sbjct: 641 RNITRNIGEYNTMLQPINQVKFLGVIFDSKLRWTPHINYIKKRA 684
>UniRef50_UPI0000E47234 Cluster: PREDICTED: hypothetical protein;
n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 762
Score = 32.7 bits (71), Expect = 9.7
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 KYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR--SKMSLRNKVTL*KTCIRPVM 240
K LGVT+D + F H+ + +LG I KR SK+ L KT IRP +
Sbjct: 560 KDLGVTIDYQLKFHQHVSLAVSKGYQLLG-----IMKRTFSKLDTTTLPILFKTLIRPHL 614
Query: 241 TYASV 255
Y SV
Sbjct: 615 EYGSV 619
>UniRef50_A7SR43 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 193
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +1
Query: 64 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*KTCIRPVMT 243
+K LGVTLD+S+T++ HI +V + + ++ + + + ++ V L KT + P +
Sbjct: 52 LKILGVTLDSSLTYKEHITTVLKK---VYAKVAALRRIKRVVPIQTMVALYKTYVLPHLE 108
Query: 244 Y 246
Y
Sbjct: 109 Y 109
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,944,584
Number of Sequences: 1657284
Number of extensions: 14173263
Number of successful extensions: 34615
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 33379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34603
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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