Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00076
(738 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 38 4e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 37 7e-04
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 36 0.002
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 35 0.002
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 34 0.004
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 33 0.009
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 31 0.028
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 31 0.028
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 29 0.20
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 29 0.20
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 28 0.26
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 28 0.26
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 27 0.80
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 26 1.1
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 3.2
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 4.3
AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein p... 24 5.6
AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein p... 24 5.6
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 7.4
Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase pr... 23 9.8
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 37.5 bits (83), Expect = 4e-04
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 55 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*KTCIRP 234
+R ++YLGVTL +++ PH+K V +RA I ++ S+ +K L +
Sbjct: 727 SRSIRYLGVTLQDKLSWLPHVKEVTERAGKIADATSRLLRNHSE-PRASKAKLLASVSES 785
Query: 235 VMTYAS 252
VM YA+
Sbjct: 786 VMRYAA 791
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 36.7 bits (81), Expect = 7e-04
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = +1
Query: 25 ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 150
IT+ +P++R +KYLGV L ++++ PH+K+V +A I+
Sbjct: 732 ITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIV 773
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 35.5 bits (78), Expect = 0.002
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +1
Query: 46 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 150
+P++R +KYLGV + A +++ PH+K + +A I+
Sbjct: 800 VPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 35.1 bits (77), Expect = 0.002
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +1
Query: 46 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFI---LGRLYP 165
+P++R +K+LGV + +++ PH+ +V RA I +GRL P
Sbjct: 744 VPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQIAQAVGRLMP 786
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 34.3 bits (75), Expect = 0.004
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 22 PITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 159
P+ + + R ++YLGV L +++RPH++ V D+A ++ L
Sbjct: 726 PVNICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRAL 771
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 33.1 bits (72), Expect = 0.009
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 55 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 183
+R +KYLG+ +D + + HIK V +RA L M+ RS
Sbjct: 711 SRHLKYLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRS 753
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 31.5 bits (68), Expect = 0.028
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 16 TPPITLFRQ---PIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 150
TPP FR + +R ++YLGV L + +R H+ V ++A+ ++
Sbjct: 771 TPPQVTFRVGDVEVQSSRSIRYLGVQLQDHLKWRDHVTKVSEKASRVV 818
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 31.5 bits (68), Expect = 0.028
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +1
Query: 55 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*KTCIRP 234
+R ++YLGVTL +++ PH++ V RA I + ++ S +K L +
Sbjct: 794 SRTMRYLGVTLHDHLSWLPHVREVTTRARKIADAVTRLLRNHSGPK-TSKARLLASVAES 852
Query: 235 VMTYAS 252
V+ YA+
Sbjct: 853 VIRYAA 858
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 28.7 bits (61), Expect = 0.20
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 67 KYLGVTLDASMTFRPHIKSVRDRAAFILG 153
K LGV LD+S+ F+ HI V R +LG
Sbjct: 845 KDLGVLLDSSLNFKQHIDDVVARGNQLLG 873
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 28.7 bits (61), Expect = 0.20
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 55 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL*KTCIRP 234
+R +KYLG+ LD + + HI+ +RA + L M+ ++ S + + T +
Sbjct: 706 SRTLKYLGMVLDDRLEYTSHIRYAVERATKLWTTLVRMMPNKAGPSSNVRRVIALTVVAK 765
Query: 235 VMTYAS 252
V YAS
Sbjct: 766 V-RYAS 770
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 28.3 bits (60), Expect = 0.26
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 1 RRRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 138
R+ N P+ + R ++YLGV +D ++++ H++ +A
Sbjct: 730 RQGNINVPVVINGVERRTTRSIRYLGVVIDNQLSWKSHVEYCTTKA 775
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 28.3 bits (60), Expect = 0.26
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 58 RKVKYLGVTLDASMTFRPHIK 120
R +KYLGV +D ++FR H++
Sbjct: 703 RHLKYLGVIIDDRLSFRKHVE 723
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 26.6 bits (56), Expect = 0.80
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 58 RKVKYLGVTLDASMTFRPHIK 120
R +KYLGV +D + F+ H++
Sbjct: 764 RSLKYLGVVIDDRLKFKSHLE 784
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 26.2 bits (55), Expect = 1.1
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 1 RRRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILG 153
RR P + I + ++YLGV + ++++PH++ +A ++G
Sbjct: 716 RRGQLKVPFRVGDTIIHSKQSIRYLGVQIHDHLSWKPHVELSTAKALRVVG 766
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 24.6 bits (51), Expect = 3.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 1 RRRNFTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 138
RR + PI + I + ++YLGV + +RPH+ ++A
Sbjct: 713 RRGHPEIPIRVGGLEIRSKQAIRYLGVMIHDHFLWRPHVTMAVEKA 758
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 24.2 bits (50), Expect = 4.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 116 ICGRNVIDASRVTPRYLTFLAQGMG 42
+CG +D ++VT TFL G G
Sbjct: 805 VCGARAMDIAKVTCTVNTFLWDGSG 829
>AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 64 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 162
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 64 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 162
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.4 bits (48), Expect = 7.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 90 IQGNAQVLDLPGPG 49
+ GN QV + PGPG
Sbjct: 220 LDGNVQVREAPGPG 233
>Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase
protein.
Length = 247
Score = 23.0 bits (47), Expect = 9.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 315 CRLAVGAPWFVRNVDLHDDLGLES 386
C+ G P VRN D H+ +G+ S
Sbjct: 188 CQGDSGGPLLVRNGDKHEIVGIVS 211
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,236
Number of Sequences: 2352
Number of extensions: 14595
Number of successful extensions: 37
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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