Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00076
         (738 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g33350.1 68415.m04088 hypothetical protein                          31   1.1  
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate...    28   5.6  

>At2g33350.1 68415.m04088 hypothetical protein
          Length = 440

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +3

Query: 381 ESIRKYMKSASERYFDKAMRHDNRLIVADA 470
           E IR+YMK  +ER F+K +++  R  +AD+
Sbjct: 343 EKIRRYMKKRNERNFNKKIKYACRKTLADS 372


>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
           similar to glucan endo-1,3-beta-glucosidase precursor
           SP:P52409 from [Triticum aestivum]
          Length = 330

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 445 IIALSLPTLTTPRILIMQEPVTSTP*TRPYGSI 543
           +I +  PTLT P    +  PVT  P T+P G++
Sbjct: 82  VITIPPPTLTPPVTNPVTNPVTQYPPTQPSGTV 114


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,359,492
Number of Sequences: 28952
Number of extensions: 303569
Number of successful extensions: 632
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)