BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00074 (813 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_08_0786 - 20540061-20542106 30 2.5 06_03_0592 + 22585546-22588573,22588680-22589032 29 3.3 12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 28 7.7 01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 28 7.7 >10_08_0786 - 20540061-20542106 Length = 681 Score = 29.9 bits (64), Expect = 2.5 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -2 Query: 659 CTISRNTGMFASISGWVASSGSLQKLVSTDNATDLYTDGG 540 CT +RN M AS+ G + G +V+ + D+Y G Sbjct: 219 CTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNG 258 >06_03_0592 + 22585546-22588573,22588680-22589032 Length = 1126 Score = 29.5 bits (63), Expect = 3.3 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +1 Query: 508 VLTSNSVEDDCPPSVYKSVALSVLTNFCNEPELATHPEMLAN 633 VLTSN + D+ PPS+ S +L + + N + PE LAN Sbjct: 201 VLTSNRLTDEIPPSLGSSFSLRYV-DLGNNDITGSIPESLAN 241 >12_02_0118 - 13869237-13869307,13869375-13869465,13870321-13870440, 13870668-13870795,13871159-13871270,13871719-13871817, 13871918-13871992,13872099-13872320,13873177-13874034 Length = 591 Score = 28.3 bits (60), Expect = 7.7 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 219 TLIINVMWIESLLNDPTAIPRTQWSP 296 +LI W SLLND A+P+ W P Sbjct: 552 SLIATATWDVSLLNDNAALPQWVWWP 577 >01_06_0768 - 31829753-31829851,31830454-31830593,31830729-31830818, 31830905-31831059,31831598-31831663,31831862-31831931, 31832299-31832429,31832516-31832702,31832828-31832894 Length = 334 Score = 28.3 bits (60), Expect = 7.7 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 69 VSAILFDLDNTLIQTRKGDTKACNK 143 VSA++FDLD TL+ T + N+ Sbjct: 8 VSAVIFDLDGTLLDTERATRDVLNE 32 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,231,309 Number of Sequences: 37544 Number of extensions: 365533 Number of successful extensions: 801 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 801 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2221181676 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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