Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00074
         (813 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0786 - 20540061-20542106                                         30   2.5  
06_03_0592 + 22585546-22588573,22588680-22589032                       29   3.3  
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704...    28   7.7  
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308...    28   7.7  

>10_08_0786 - 20540061-20542106
          Length = 681

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 659 CTISRNTGMFASISGWVASSGSLQKLVSTDNATDLYTDGG 540
           CT +RN  M AS+ G +   G    +V+  +  D+Y   G
Sbjct: 219 CTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNG 258


>06_03_0592 + 22585546-22588573,22588680-22589032
          Length = 1126

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 508 VLTSNSVEDDCPPSVYKSVALSVLTNFCNEPELATHPEMLAN 633
           VLTSN + D+ PPS+  S +L  + +  N     + PE LAN
Sbjct: 201 VLTSNRLTDEIPPSLGSSFSLRYV-DLGNNDITGSIPESLAN 241


>12_02_0118 -
           13869237-13869307,13869375-13869465,13870321-13870440,
           13870668-13870795,13871159-13871270,13871719-13871817,
           13871918-13871992,13872099-13872320,13873177-13874034
          Length = 591

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 219 TLIINVMWIESLLNDPTAIPRTQWSP 296
           +LI    W  SLLND  A+P+  W P
Sbjct: 552 SLIATATWDVSLLNDNAALPQWVWWP 577


>01_06_0768 -
           31829753-31829851,31830454-31830593,31830729-31830818,
           31830905-31831059,31831598-31831663,31831862-31831931,
           31832299-31832429,31832516-31832702,31832828-31832894
          Length = 334

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 69  VSAILFDLDNTLIQTRKGDTKACNK 143
           VSA++FDLD TL+ T +      N+
Sbjct: 8   VSAVIFDLDGTLLDTERATRDVLNE 32


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,231,309
Number of Sequences: 37544
Number of extensions: 365533
Number of successful extensions: 801
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)