Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00074
         (813 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-469|AAF54119.1|  723|Drosophila melanogaster CG2330-PA ...   100   2e-21
AE014298-788|AAF46077.4|  355|Drosophila melanogaster CG15771-PA...    41   0.002
AY089649-1|AAL90387.1|  666|Drosophila melanogaster RH06780p pro...    29   10.0 
AE014296-1999|AAF50030.3|  666|Drosophila melanogaster CG32085-P...    29   10.0 

>AE014297-469|AAF54119.1|  723|Drosophila melanogaster CG2330-PA
           protein.
          Length = 723

 Score =  100 bits (240), Expect = 2e-21
 Identities = 46/88 (52%), Positives = 63/88 (71%)
 Frame = +1

Query: 502 QEVLTSNSVEDDCPPSVYKSVALSVLTNFCNEPELATHPEMLANIPVFLDIVQTSXXXXX 681
           +++L S  + +DCPP VYKSVALS+LT FC E ELATH +++  IP  L+IV+ +     
Sbjct: 58  KKLLVSKDLPNDCPPLVYKSVALSILTCFCQEEELATHKDIIDAIPTLLEIVEQADDEDY 117

Query: 682 XXXLIIISEAYTCLQCIAEHEAGQRALL 765
              LI++SEAY+CL+ IA HE GQ+ALL
Sbjct: 118 EDNLIVVSEAYSCLKSIASHEPGQQALL 145



 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 43/59 (72%), Positives = 48/59 (81%)
 Frame = +2

Query: 332 MGDVSEPIKKCILILKNARSDTEKFAALFMVTKLVKSKDCNSTAKKALFEAIGFQFLKK 508
           M DV EP++KC  +LK  +SDTEKFAALFMVTKLVK KDCN+  KK LFEAIGF FLKK
Sbjct: 1   MTDVPEPVRKCASLLKGTKSDTEKFAALFMVTKLVKGKDCNAAGKKLLFEAIGFPFLKK 59


>AE014298-788|AAF46077.4|  355|Drosophila melanogaster CG15771-PA,
           isoform A protein.
          Length = 355

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 27  QIMANSGYFDEN-SDVSAILFDLDNTLIQTRKGDTKACNK 143
           Q+ A   +FD   + + A  FDLDNTLI TR GD+KA  K
Sbjct: 11  QLTATHSHFDATCAKIRAFYFDLDNTLIPTRAGDSKAIRK 50


>AY089649-1|AAL90387.1|  666|Drosophila melanogaster RH06780p
           protein.
          Length = 666

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +2

Query: 575 YSPTSVMNLNLQPIQKCWQTYQYSLI*YKHQIMMTTMITLS 697
           +SP    +L++  +Q CW+   + ++   H +   T+++LS
Sbjct: 475 FSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSLS 515


>AE014296-1999|AAF50030.3|  666|Drosophila melanogaster CG32085-PA
           protein.
          Length = 666

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +2

Query: 575 YSPTSVMNLNLQPIQKCWQTYQYSLI*YKHQIMMTTMITLS 697
           +SP    +L++  +Q CW+   + ++   H +   T+++LS
Sbjct: 475 FSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSLS 515


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,234,875
Number of Sequences: 53049
Number of extensions: 657090
Number of successful extensions: 1346
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)