Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00073
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 105 5e-22
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 104 1e-21
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 104 1e-21
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 99 7e-20
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 96 4e-19
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 90 3e-17
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 89 4e-17
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 86 4e-16
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 85 9e-16
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 85 1e-15
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 84 2e-15
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 82 8e-15
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 81 1e-14
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 81 1e-14
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 81 2e-14
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 76 6e-13
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 75 1e-12
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 75 1e-12
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 74 2e-12
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 70 3e-11
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 70 4e-11
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 65 8e-10
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 64 1e-09
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 64 1e-09
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 62 6e-09
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 61 1e-08
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 60 4e-08
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 57 2e-07
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 55 1e-06
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 53 3e-06
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 50 4e-05
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 42 0.011
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 38 0.18
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.96
UniRef50_A7HHQ5 Cluster: Bacterioferritin; n=3; Bacteria|Rep: Ba... 32 6.8
UniRef50_Q6A7K4 Cluster: Conserved protein; n=5; Bacteria|Rep: C... 32 8.9
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 105 bits (253), Expect = 5e-22
Identities = 51/99 (51%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Frame = +3
Query: 12 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 191
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 192 LRHIYIRSPVGVKTVTKIFGGANVM-ELHLHISAGHQAV 305
RH+Y+R GV ++TKI+GG + H S G ++V
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Score = 79.0 bits (186), Expect = 6e-14
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 412
+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 83 QRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 104 bits (250), Expect = 1e-21
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = +3
Query: 12 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 191
M V+VKDV+ K + AA LK++GK+ P+ +D+VKT KELAPYDPDW+YVR AAI
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAI 60
Query: 192 LRHIYIRSPVGVKTVTKIFGGA 257
RHIY+R VGV + K++GG+
Sbjct: 61 ARHIYLRKQVGVGRLCKVYGGS 82
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +2
Query: 266 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 412
G+ PSH SGS+ RK +QSLE + ++EK +GGR ++ QG+RDLDRI
Sbjct: 86 GMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRI 134
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 104 bits (249), Expect = 1e-21
Identities = 45/77 (58%), Positives = 59/77 (76%)
Frame = +3
Query: 24 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 203
TVKDV + VK +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67
Query: 204 YIRSPVGVKTVTKIFGG 254
Y+R +GV KI+GG
Sbjct: 68 YLRQGIGVGGFQKIYGG 84
Score = 66.1 bits (154), Expect = 4e-10
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 QDLWWGK-RNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 412
Q ++ G+ RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 79 QKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 137
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 98.7 bits (235), Expect = 7e-20
Identities = 41/88 (46%), Positives = 63/88 (71%)
Frame = +3
Query: 12 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 191
+R VTV+DV+ + +K A HLK++GK+++P D+VKTA FKE +P DPDW+Y+R A+I
Sbjct: 10 VRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASI 69
Query: 192 LRHIYIRSPVGVKTVTKIFGGANVMELH 275
R +Y+R GV ++ K++GGA +H
Sbjct: 70 ARKVYLRQYTGVGSLKKVYGGAARKGVH 97
Score = 52.0 bits (119), Expect = 8e-06
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +2
Query: 260 RNGVTPSHFCRSSGSIARKALQSLEALKLVEK----VQDGGRILTTQGRRDLDRI 412
R GV HF ++SG + R LQ LE +K+VEK V GGR +T+ G++DLDRI
Sbjct: 93 RKGVHRQHFQKASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRI 147
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 96.3 bits (229), Expect = 4e-19
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +3
Query: 12 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 191
M V+VKDV+ VK +A LKKTGKV++P+ D+VK + +LAPY+PDWFYVRCAAI
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAI 60
Query: 192 LRHIYIRSPVGVKTVTKIF 248
LRH+YIR P G+ + K F
Sbjct: 61 LRHLYIR-PTGLTGLCKAF 78
Score = 66.5 bits (155), Expect = 3e-10
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 412
KRNGV PSH + GS+ RKA+Q +EAL L +K + GGR LT+ GRRDLDR+
Sbjct: 82 KRNGVKPSHRSLAHGSVIRKAIQQMEALGLCQKREGGGRSLTSAGRRDLDRL 133
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 89.8 bits (213), Expect = 3e-17
Identities = 39/72 (54%), Positives = 53/72 (73%)
Frame = +3
Query: 36 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 215
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP D DW+YVR A++ R +YIRS
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRS 69
Query: 216 PVGVKTVTKIFG 251
P GV + +++G
Sbjct: 70 PTGVGALRRVYG 81
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/43 (69%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 382
KR GVTP+HF ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 84 KRRGVTPNHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 89.4 bits (212), Expect = 4e-17
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +3
Query: 24 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 203
TVKDV + V T A+HLK+ G +++P +D +KTA +ELAPYDPDW Y+R A+I R +
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 204 YIRSPVGVKTVTKIFG 251
YIR +G KI+G
Sbjct: 72 YIRGGIGTGEFRKIYG 87
Score = 46.8 bits (106), Expect = 3e-04
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 406
KR G+ P +SSG + R +LQ LE L + EK + GGR +T++G+ ++D
Sbjct: 90 KRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRITSKGQSEMD 139
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 86.2 bits (204), Expect = 4e-16
Identities = 37/82 (45%), Positives = 56/82 (68%)
Frame = +3
Query: 6 GKMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCA 185
GK + T+KDV + +KT A H K+ GK+ VP +++K++ +E AP +PDW+Y+RCA
Sbjct: 24 GKRKGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCA 83
Query: 186 AILRHIYIRSPVGVKTVTKIFG 251
A+LR IY+R VG ++K FG
Sbjct: 84 AVLRAIYLRPGVGYGGLSKRFG 105
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 85.0 bits (201), Expect = 9e-16
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +3
Query: 18 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 197
+VT+KDV + + T A LKKTG+V++P+ D+ KTA ++EL P +PDW Y R A + R
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLAR 64
Query: 198 HIYIRSPVGVKTVTKIFGG 254
+YIR GV T ++FGG
Sbjct: 65 KVYIRGGDGVATYRRVFGG 83
Score = 52.8 bits (121), Expect = 4e-06
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRDLDRI 412
+RNGV P+HF +G R L+ L+ LK++E GGR +T GRRDLDRI
Sbjct: 85 RRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDLDRI 137
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 84.6 bits (200), Expect = 1e-15
Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 20/97 (20%)
Frame = +3
Query: 24 TVKDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 143
TVKDV + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 144 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGG 254
L PYDPDW+Y R A+I R IY+R +GV KI+GG
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGG 104
Score = 66.1 bits (154), Expect = 4e-10
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 QDLWWGK-RNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 412
Q ++ G+ RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 99 QKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 157
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 84.2 bits (199), Expect = 2e-15
Identities = 35/75 (46%), Positives = 51/75 (68%)
Frame = +3
Query: 27 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 206
+KDV +K A HLKK+GK+++PE +D VKT KELAP +PDW Y+R AAI R +Y
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVY 66
Query: 207 IRSPVGVKTVTKIFG 251
+ + +GV + + +G
Sbjct: 67 LNNGIGVMALRRAYG 81
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +2
Query: 275 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 412
PSH SG + R LQ LE + +V K+Q GR LT +GR+D+D+I
Sbjct: 90 PSHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLTKEGRKDMDKI 134
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 81.8 bits (193), Expect = 8e-15
Identities = 37/76 (48%), Positives = 51/76 (67%)
Frame = +3
Query: 24 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 203
T KDV +++ A LKK GK+ +PE +D VKTA KEL P + DW Y+R A+ILRH+
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIRAASILRHL 77
Query: 204 YIRSPVGVKTVTKIFG 251
Y+R VGV ++K +G
Sbjct: 78 YVRPNVGVGALSKFYG 93
Score = 36.3 bits (80), Expect = 0.41
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRDLDRI 412
+RNG +H +S I R L L++L LVE G R L+ QG+R+LD I
Sbjct: 96 QRNGTARNHSAVASRGIIRYCLIQLQSLGLVEFNPNTGTRRLSPQGQRELDSI 148
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 81.4 bits (192), Expect = 1e-14
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +3
Query: 18 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 197
+ ++KD D VK A H+K G ++ P+ +D KT+ KELAP DPDWFY+R AA+LR
Sbjct: 25 NTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLR 84
Query: 198 HIYIRSPVGVKTVTKIF 248
H+Y GV + K++
Sbjct: 85 HLYFHPDSGVDRLRKVY 101
Score = 42.3 bits (95), Expect = 0.006
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQG 391
KRNG P+H CR+SG I R +Q LE++ +E+ ++ GR L+ +G
Sbjct: 105 KRNGSAPNHTCRASGKILRTIVQQLESIGFLEQDLKKHGRRLSRKG 150
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 81.0 bits (191), Expect = 1e-14
Identities = 37/79 (46%), Positives = 48/79 (60%)
Frame = +3
Query: 24 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 203
TVKDV ++ A +LKK K+K+PE +VKT KE +P D DW YVR AA+ R I
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKI 116
Query: 204 YIRSPVGVKTVTKIFGGAN 260
Y+R GV +T +FG N
Sbjct: 117 YVRGHWGVGNLTHMFGSVN 135
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 80.6 bits (190), Expect = 2e-14
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +3
Query: 24 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 203
TV DV D ++ VA LK KVK PE ++ VKT KE P +PDW+YVR AA+LR +
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 204 YIRSPVGVKTVTKIFGG 254
YI PVGV ++ +GG
Sbjct: 63 YIDGPVGVNSLRTHYGG 79
Score = 45.2 bits (102), Expect = 9e-04
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 409
K G P F R SG+I R+ALQ LE L+++ ++ GR++T +GR LD+
Sbjct: 81 KDRGSRPEKFRRGSGAIIRRALQQLEESGLIKR-EENGRVITPEGRSFLDK 130
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 75.8 bits (178), Expect = 6e-13
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +3
Query: 24 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 203
TV DV D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRV 62
Query: 204 YIRSPVGVKTVTKIFGGA 257
Y+ P+GV+ + +GG+
Sbjct: 63 YVDGPLGVERMRSFYGGS 80
Score = 36.3 bits (80), Expect = 0.41
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 412
K G P+ F + SGS+ RKALQ LEA L+ V D GR ++ G LD +
Sbjct: 81 KNRGSKPNAFRKGSGSVLRKALQQLEAAGLI--VHDKTGRKVSPAGMAFLDSV 131
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Frame = +3
Query: 15 RSVTVKDVE---QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCA 185
+++ ++DVE K + +A LK+ GK+ +P +D VKT+ EL P D DW+YVR A
Sbjct: 73 QNLQIEDVEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAA 132
Query: 186 AILRHIYIRSPVGVKTVTKIFG 251
A+ RHIY+R VGV + K+ G
Sbjct: 133 AVARHIYMRKTVGVGRLRKVHG 154
Score = 50.4 bits (115), Expect = 2e-05
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 412
K G P+H +SGS+ RK +QSLE + ++E ++ GGR +T G+RDLDRI
Sbjct: 157 KNRGSRPNHHVDASGSVDRKIIQSLEKIGVLEYDEEKGGRRITQAGQRDLDRI 209
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 74.5 bits (175), Expect = 1e-12
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = +3
Query: 24 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 203
TVKDV ++ A+HLKK K+ +PE T+ +ELAP D DW Y+R AA+ R +
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68
Query: 204 YIRSPVGVKTVTKIFG 251
Y++ G+ T+ IFG
Sbjct: 69 YLKPHTGISTLKHIFG 84
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 73.7 bits (173), Expect = 2e-12
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +3
Query: 24 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 203
TV DV D +V+ VA LK+ ++K PE VKT R KE P DW+Y R A+ILR +
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 204 YIRSPVGVKTVTKIFGG 254
YI PVG++ + +GG
Sbjct: 63 YIDGPVGIERLRTYYGG 79
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 412
K G P F ++ GSI RKALQ LEA +EKV GR++T +GR LD+I
Sbjct: 81 KNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKI 132
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +3
Query: 42 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 200
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH 208
Score = 66.1 bits (154), Expect = 4e-10
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 260 RNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 412
R+ V PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RDLDRI
Sbjct: 207 RHRVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRI 257
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 69.7 bits (163), Expect = 4e-11
Identities = 32/73 (43%), Positives = 45/73 (61%)
Frame = +3
Query: 36 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 215
V ++V+ +A LK ++K PE VKT R KE P DPDW+Y+R A+ILR +Y+
Sbjct: 7 VPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDG 66
Query: 216 PVGVKTVTKIFGG 254
PVGV + +GG
Sbjct: 67 PVGVSRLRTYYGG 79
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 65.3 bits (152), Expect = 8e-10
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +3
Query: 18 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 197
+ ++ D + D + A ++ + P+ +D VKT+ KELAP DP WFY+R AAILR
Sbjct: 25 NTSLNDCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILR 84
Query: 198 HIYIRSPVGVKTVTKIF 248
H+Y G+ + +++
Sbjct: 85 HLYFHPDEGIGRLRRVY 101
Score = 40.7 bits (91), Expect = 0.019
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILTTQG 391
KR G P+H C +SG I R +Q LEA +EK +D GR L+ +G
Sbjct: 105 KRRGCAPNHTCPASGKIIRTIVQQLEANGFLEKSKDNKGRRLSRRG 150
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/78 (38%), Positives = 45/78 (57%)
Frame = +3
Query: 21 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 200
V+VK V D ++ V+ LK+ K+K P + VKT KE P DW YVR A++LR
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRK 61
Query: 201 IYIRSPVGVKTVTKIFGG 254
+YI +G+ ++ +GG
Sbjct: 62 LYINGYLGISRMSSEYGG 79
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 64.5 bits (150), Expect = 1e-09
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +3
Query: 24 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 203
TV DV D ++K VA LK V PE VKT KE +P DW+Y+R A+I R +
Sbjct: 3 TVYDVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 204 YIRSPVGVKTVTKIFGG 254
YI PVG++ + +GG
Sbjct: 61 YIDGPVGIERLRTFYGG 77
Score = 46.0 bits (104), Expect = 5e-04
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 412
KR G P F + SG+I R AL LE L V+K ++G R++T GR LD++
Sbjct: 79 KRRGSKPPKFRKGSGAIVRNALHQLEQLGFVKKTREG-RVVTPMGRSFLDKV 129
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 62.5 bits (145), Expect = 6e-09
Identities = 25/74 (33%), Positives = 46/74 (62%)
Frame = +3
Query: 27 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 206
+KDV+ + + A +LK K+ P+ + VKT + ++LAP D DW++++ ++ILR +Y
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLY 109
Query: 207 IRSPVGVKTVTKIF 248
I +GV + + F
Sbjct: 110 IHPDIGVGFLRRQF 123
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 61.3 bits (142), Expect = 1e-08
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 30 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 209
+++ D +V +A H + T ++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYL 73
Query: 210 RSPVGVKTVTKIFGG---ANVMELHLH 281
+ + +G A M H H
Sbjct: 74 HHDASLSGLAFHYGANMKAVTMPKHHH 100
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 59.7 bits (138), Expect = 4e-08
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +3
Query: 21 VTVKDVEQDKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 197
V +V D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR
Sbjct: 2 VNALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILR 61
Query: 198 HIY-IRSPVGVKTVTKIFGG 254
+Y P+G++T I+GG
Sbjct: 62 KLYKSPEPIGIETFRTIYGG 81
Score = 46.0 bits (104), Expect = 5e-04
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 245 LWWGKRN-GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 406
++ G++N G P HF ++ GS+ RK LQ LE LV KV GR ++ GR LD
Sbjct: 78 IYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLD 132
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +3
Query: 27 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 206
V DV D ++ +A LK + P + VKT + P + DW++ RCA+I+R IY
Sbjct: 4 VYDVPADVLIGKLAEILKNED-IPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIY 62
Query: 207 IRSPVGVKTVTKIFGG 254
+ P+G+ + K +GG
Sbjct: 63 LHGPIGINELRKDYGG 78
Score = 47.6 bits (108), Expect = 2e-04
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +2
Query: 200 YLHSLTCWSQDCHQDLWWGKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 379
YLH + +D GK +G +H + G+I R A+ LE L +EKV+ GRI+
Sbjct: 62 YLHG-PIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIV 120
Query: 380 TTQGRRDLDRI 412
+ QG + LDR+
Sbjct: 121 SKQGMQKLDRL 131
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 54.8 bits (126), Expect = 1e-06
Identities = 20/76 (26%), Positives = 45/76 (59%)
Frame = +3
Query: 27 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 206
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P +W + R A+I+ Y
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFY 64
Query: 207 IRSPVGVKTVTKIFGG 254
I +G + + +I+ G
Sbjct: 65 IYKKLGTRQLVRIYNG 80
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 53.2 bits (122), Expect = 3e-06
Identities = 25/77 (32%), Positives = 46/77 (59%)
Frame = +3
Query: 21 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 200
VT+ DV D +++ VAA L+ ++ P+ ++ K+ KEL P D++YVR A++LR
Sbjct: 14 VTIYDVPGDALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRK 71
Query: 201 IYIRSPVGVKTVTKIFG 251
+ P+G++ + +G
Sbjct: 72 VAQNEPIGIERLATEYG 88
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/70 (31%), Positives = 40/70 (57%)
Frame = +3
Query: 45 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 224
D ++ +A LKK ++ P+ + VKT + P D W++ RCA+++R IY+ P+G
Sbjct: 4 DVLIGRLAEILKKE-ELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIG 62
Query: 225 VKTVTKIFGG 254
+ + +GG
Sbjct: 63 INGLRSEYGG 72
Score = 42.3 bits (95), Expect = 0.006
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 254 GKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 412
GK G ++ ++ G+I R A+ LE L +EK+ GRI++ QG + LDR+
Sbjct: 73 GKPRGYGAANHRKAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKLDRL 125
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 41.5 bits (93), Expect = 0.011
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2
Query: 257 KRNGVTPSHFCRSSGSIARKALQSLEALK 343
+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 79 QRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 37.5 bits (83), Expect = 0.18
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = -2
Query: 245 DLGDSLDSNR*ANVNMTKDGSTTHIEPIRVIRSQLFEASCLYKIHVLRYLDFARFF*VSS 66
DLG + + V + + GS++ +EP+ ++ S+LF L +H F
Sbjct: 80 DLGHGANPSATPEVQVPRCGSSSRVEPVLIVGSKLFVLGQLDGVHPFGDFQLPGLFEEGC 139
Query: 65 DSFNNLVLFNILYCDGTHLA 6
S + L+L ++ Y + H A
Sbjct: 140 QSSDELLLVHVFYSNSRHRA 159
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 35.1 bits (77), Expect = 0.96
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 249 GGANVMELHLHISAGHQAVLHARLCNRWRH 338
G A +E H +AG + +HAR+ RWRH
Sbjct: 194 GAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_A7HHQ5 Cluster: Bacterioferritin; n=3; Bacteria|Rep:
Bacterioferritin - Anaeromyxobacter sp. Fw109-5
Length = 158
Score = 32.3 bits (70), Expect = 6.8
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 240 KIFGGANVMELHLHISAGHQAVLHARLCNRWRH*SLLRKFRTVVAFSPHKVDETLTESL 416
K+ G N + L ++A HQ +LHAR+C W + L +K + DE + L
Sbjct: 6 KVLGLLNEL-LSSELTAVHQYLLHARMCQNWGYERLFQKIHEESRDELNHADELIERIL 63
>UniRef50_Q6A7K4 Cluster: Conserved protein; n=5; Bacteria|Rep:
Conserved protein - Propionibacterium acnes
Length = 405
Score = 31.9 bits (69), Expect = 8.9
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +3
Query: 57 KTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTV 236
+ ++AH+ + +V + DL K AR +E+A WF V + + R VKT+
Sbjct: 66 RQISAHVFERWEVDPTQWTDLPKAAR-QEIADA---WFPVLLTKVSQQSCDRGTT-VKTL 120
Query: 237 TKIFGGANVMELHLHISAGHQAVLHARLC 323
++ GGA V + ++ A + A LC
Sbjct: 121 WRLHGGALVESVLMYYPATRHSAARATLC 149
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,986,360
Number of Sequences: 1657284
Number of extensions: 8816005
Number of successful extensions: 22625
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 21945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22615
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -