Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00070
         (804 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9UNL2 Cluster: Translocon-associated protein subunit g...   109   8e-23
UniRef50_Q29330 Cluster: Translocon associated protein gamma cha...    81   4e-14
UniRef50_Q95XS1 Cluster: Putative uncharacterized protein; n=2; ...    74   5e-12
UniRef50_Q5D974 Cluster: SJCHGC01752 protein; n=2; Schistosoma j...    71   5e-11
UniRef50_Q4P9C6 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_Q38XR7 Cluster: Chromosome seggregation Smc protein; n=...    33   6.4  
UniRef50_O41953 Cluster: Kinase; n=1; Murid herpesvirus 4|Rep: K...    33   8.4  

>UniRef50_Q9UNL2 Cluster: Translocon-associated protein subunit
           gamma; n=36; Eumetazoa|Rep: Translocon-associated
           protein subunit gamma - Homo sapiens (Human)
          Length = 185

 Score =  109 bits (262), Expect = 8e-23
 Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = +3

Query: 249 LVILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKL--ADDKKMSRKEKDER 422
           L  ++T  ST+L+A AY+N KF LKH             ++RKL  AD++KMSRKEKDER
Sbjct: 61  LYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDER 120

Query: 423 ILWKKNEVADYEATTYSIFYNNALFLTIV 509
           ILWKKNEVADYEATT+SIFYNN LFL +V
Sbjct: 121 ILWKKNEVADYEATTFSIFYNNTLFLVVV 149



 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 37/62 (59%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
 Frame = +1

Query: 70  MSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLE-ISTAI 246
           M+ K +     EE+LLLQDFSRN+S KSSALF+GNAFIVSAIPIWL+WR+  ++ I +A+
Sbjct: 1   MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAV 60

Query: 247 IW 252
           ++
Sbjct: 61  LY 62


>UniRef50_Q29330 Cluster: Translocon associated protein gamma chain;
           n=2; Laurasiatheria|Rep: Translocon associated protein
           gamma chain - Sus scrofa (Pig)
          Length = 77

 Score = 80.6 bits (190), Expect = 4e-14
 Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
 Frame = +3

Query: 249 LVILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKL--ADDKKMSRKEKDER 422
           L  ++T  ST+L+A AY+N KF LKH             ++RKL  AD++KMSRKEKDER
Sbjct: 6   LYSVMTLVSTYLVAXAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDER 65

Query: 423 ILWKKNEVADYE 458
           ILWKKNEVADYE
Sbjct: 66  ILWKKNEVADYE 77


>UniRef50_Q95XS1 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 178

 Score = 73.7 bits (173), Expect = 5e-12
 Identities = 38/84 (45%), Positives = 53/84 (63%)
 Frame = +3

Query: 258 LVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERILWKK 437
           L    + +LL+LA +N K  LKH             +S + A DKKM+ KEK+ER L++K
Sbjct: 59  LSAVGTAYLLSLACKNQKCLLKHQIVMKRGSAVEREISGQYAADKKMTVKEKEERALFRK 118

Query: 438 NEVADYEATTYSIFYNNALFLTIV 509
           NEVAD E+T  S+FY N+L+LTI+
Sbjct: 119 NEVADTESTYLSVFYTNSLYLTIM 142



 Score = 57.6 bits (133), Expect = 3e-07
 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
 Frame = +1

Query: 97  TKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEI-STAIIW 252
           TKEEELLL  +S   STK +  FY NA I+S  P++LF+ VH +EI  + ++W
Sbjct: 5   TKEEELLLSSYSATSSTKGNLFFYLNALIISIAPLYLFYGVHQMEIQDSLVVW 57


>UniRef50_Q5D974 Cluster: SJCHGC01752 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC01752 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 173

 Score = 70.5 bits (165), Expect = 5e-11
 Identities = 32/87 (36%), Positives = 55/87 (63%)
 Frame = +3

Query: 249 LVILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERIL 428
           L  +++ AST+L++LAY+N+K  L               ++ +   DKK+S+K +++ + 
Sbjct: 57  LFAIISLASTFLMSLAYKNSKAPLMERIAIRRTEAITKEVNSEACKDKKLSKKNREDIVR 116

Query: 429 WKKNEVADYEATTYSIFYNNALFLTIV 509
            +  +VADYE+TT+SIFYNN LFL ++
Sbjct: 117 ERTKKVADYESTTFSIFYNNCLFLLLL 143



 Score = 52.4 bits (120), Expect = 1e-05
 Identities = 22/46 (47%), Positives = 33/46 (71%)
 Frame = +1

Query: 97  TKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEI 234
           TKE+E LL+++S+  S  S  L Y NA ++S+IPIWLF+ VH + +
Sbjct: 6   TKEDERLLEEYSQAASKSSEKLVYVNAIMISSIPIWLFFGVHKMPL 51


>UniRef50_Q4P9C6 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1179

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
 Frame = +3

Query: 132 PECVHKIVCSLLRERFYCFSNSNLVVLEGTFIGNKHRNYLVI--LVTAASTW--LLAL-A 296
           PE   ++VC++L    Y FSNS L +L   F+ +    YL +  L    +TW  L  L A
Sbjct: 266 PELFQQMVCTVLESESYLFSNSELDILSAFFMLSYPARYLFVRLLQRKKNTWYRLDRLEA 325

Query: 297 YRNTKFQLK 323
           YR+    LK
Sbjct: 326 YRSEVHDLK 334


>UniRef50_Q38XR7 Cluster: Chromosome seggregation Smc protein; n=1;
           Lactobacillus sakei subsp. sakei 23K|Rep: Chromosome
           seggregation Smc protein - Lactobacillus sakei subsp.
           sakei (strain 23K)
          Length = 1186

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = -2

Query: 335 SNTVLQLELSVTVGKSQQPGASCRY*DNQIIAVLISNE-CTLQNNQIGIAETIKAFP*KR 159
           ++ + QLE   T  K QQ      Y +       + NE  TL+    G    +KA   + 
Sbjct: 322 ADRIAQLETQSTTAKQQQIALKATYTEKVATLTDLKNELATLKRQASGSEAELKAKIEQI 381

Query: 158 ADDFVDTFRLKSCNNNSSSFV-KALL 84
             D++D  + ++ N N   ++ KALL
Sbjct: 382 RQDYIDQMQAQTTNRNEQQYLEKALL 407


>UniRef50_O41953 Cluster: Kinase; n=1; Murid herpesvirus 4|Rep:
           Kinase - Murid herpesvirus 4 (MuHV-4) (Murine
           gammaherpesvirus 68)
          Length = 437

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +3

Query: 531 CVHSHLQLITLCLSRLH---LDFLLYSPQEPSEDGSLMRHVIQTVLILNILDILWQLKI 698
           C++   Q   LC++ L    LDFL  SP  P   G  + +++Q  ++   +  +W L +
Sbjct: 302 CLYYSFQDCLLCMAGLQYRGLDFLKVSPPPPDRPGKYLAYMMQRTVVTQFICGVWGLSV 360


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,389,585
Number of Sequences: 1657284
Number of extensions: 14852469
Number of successful extensions: 34920
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34913
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)