Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00070
(804 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006669-1|AAP35315.1| 185|Homo sapiens signal sequence recepto... 109 1e-23
BC017203-1|AAH17203.1| 185|Homo sapiens signal sequence recepto... 109 1e-23
AF110647-1|AAD48587.1| 185|Homo sapiens translocon-associated p... 109 1e-23
AF087907-1|AAP97205.1| 185|Homo sapiens SSR gamma protein. 109 1e-23
D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein. 32 2.8
AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein. 32 2.8
AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribos... 32 2.8
>BT006669-1|AAP35315.1| 185|Homo sapiens signal sequence receptor,
gamma (translocon-associated protein gamma) protein.
Length = 185
Score = 109 bits (262), Expect = 1e-23
Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Frame = +3
Query: 249 LVILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKL--ADDKKMSRKEKDER 422
L ++T ST+L+A AY+N KF LKH ++RKL AD++KMSRKEKDER
Sbjct: 61 LYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDER 120
Query: 423 ILWKKNEVADYEATTYSIFYNNALFLTIV 509
ILWKKNEVADYEATT+SIFYNN LFL +V
Sbjct: 121 ILWKKNEVADYEATTFSIFYNNTLFLVVV 149
Score = 81.4 bits (192), Expect = 3e-15
Identities = 37/62 (59%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +1
Query: 70 MSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLE-ISTAI 246
M+ K + EE+LLLQDFSRN+S KSSALF+GNAFIVSAIPIWL+WR+ ++ I +A+
Sbjct: 1 MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAV 60
Query: 247 IW 252
++
Sbjct: 61 LY 62
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 509 ILSSFYILRTFTPTVNYIV 565
I++SF+IL+ F PTVNYI+
Sbjct: 150 IVASFFILKNFNPTVNYIL 168
>BC017203-1|AAH17203.1| 185|Homo sapiens signal sequence receptor,
gamma (translocon-associated protein gamma) protein.
Length = 185
Score = 109 bits (262), Expect = 1e-23
Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Frame = +3
Query: 249 LVILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKL--ADDKKMSRKEKDER 422
L ++T ST+L+A AY+N KF LKH ++RKL AD++KMSRKEKDER
Sbjct: 61 LYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDER 120
Query: 423 ILWKKNEVADYEATTYSIFYNNALFLTIV 509
ILWKKNEVADYEATT+SIFYNN LFL +V
Sbjct: 121 ILWKKNEVADYEATTFSIFYNNTLFLVVV 149
Score = 81.4 bits (192), Expect = 3e-15
Identities = 37/62 (59%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +1
Query: 70 MSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLE-ISTAI 246
M+ K + EE+LLLQDFSRN+S KSSALF+GNAFIVSAIPIWL+WR+ ++ I +A+
Sbjct: 1 MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAV 60
Query: 247 IW 252
++
Sbjct: 61 LY 62
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 509 ILSSFYILRTFTPTVNYIV 565
I++SF+IL+ F PTVNYI+
Sbjct: 150 IVASFFILKNFNPTVNYIL 168
>AF110647-1|AAD48587.1| 185|Homo sapiens translocon-associated
protein gamma subunit protein.
Length = 185
Score = 109 bits (262), Expect = 1e-23
Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Frame = +3
Query: 249 LVILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKL--ADDKKMSRKEKDER 422
L ++T ST+L+A AY+N KF LKH ++RKL AD++KMSRKEKDER
Sbjct: 61 LYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDER 120
Query: 423 ILWKKNEVADYEATTYSIFYNNALFLTIV 509
ILWKKNEVADYEATT+SIFYNN LFL +V
Sbjct: 121 ILWKKNEVADYEATTFSIFYNNTLFLVVV 149
Score = 81.4 bits (192), Expect = 3e-15
Identities = 37/62 (59%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +1
Query: 70 MSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLE-ISTAI 246
M+ K + EE+LLLQDFSRN+S KSSALF+GNAFIVSAIPIWL+WR+ ++ I +A+
Sbjct: 1 MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAV 60
Query: 247 IW 252
++
Sbjct: 61 LY 62
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 509 ILSSFYILRTFTPTVNYIV 565
I++SF+IL+ F PTVNYI+
Sbjct: 150 IVASFFILKNFNPTVNYIL 168
>AF087907-1|AAP97205.1| 185|Homo sapiens SSR gamma protein.
Length = 185
Score = 109 bits (262), Expect = 1e-23
Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Frame = +3
Query: 249 LVILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKL--ADDKKMSRKEKDER 422
L ++T ST+L+A AY+N KF LKH ++RKL AD++KMSRKEKDER
Sbjct: 61 LYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDER 120
Query: 423 ILWKKNEVADYEATTYSIFYNNALFLTIV 509
ILWKKNEVADYEATT+SIFYNN LFL +V
Sbjct: 121 ILWKKNEVADYEATTFSIFYNNTLFLVVV 149
Score = 81.4 bits (192), Expect = 3e-15
Identities = 37/62 (59%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +1
Query: 70 MSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLE-ISTAI 246
M+ K + EE+LLLQDFSRN+S KSSALF+GNAFIVSAIPIWL+WR+ ++ I +A+
Sbjct: 1 MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAV 60
Query: 247 IW 252
++
Sbjct: 61 LY 62
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 509 ILSSFYILRTFTPTVNYIV 565
I++SF+IL+ F PTVNYI+
Sbjct: 150 IVASFFILKNFNPTVNYIL 168
>D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein.
Length = 1725
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 90 SFYKRRRVIVARF*PECVHKIVCSLLRERFYC--FSNSNLVVLEGTFI 227
S ++ R++V F P C +C+L++E+ +C S + L GT I
Sbjct: 1078 SLFRNDRLLVYGFIPHCTQATLCALIQEKEFCTMVSTTELQKTTGTMI 1125
>AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein.
Length = 1724
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 90 SFYKRRRVIVARF*PECVHKIVCSLLRERFYC--FSNSNLVVLEGTFI 227
S ++ R++V F P C +C+L++E+ +C S + L GT I
Sbjct: 1077 SLFRNDRLLVYGFIPHCTQATLCALIQEKEFCTMVSTTELQKTTGTMI 1124
>AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribosyl)
transferase protein.
Length = 1724
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 90 SFYKRRRVIVARF*PECVHKIVCSLLRERFYC--FSNSNLVVLEGTFI 227
S ++ R++V F P C +C+L++E+ +C S + L GT I
Sbjct: 1077 SLFRNDRLLVYGFIPHCTQATLCALIQEKEFCTMVSTTELQKTTGTMI 1124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,462,332
Number of Sequences: 237096
Number of extensions: 2346759
Number of successful extensions: 7486
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7482
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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