Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00070
         (804 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118492-1|AAM49861.1|  190|Drosophila melanogaster LD05267p pro...   120   2e-27
AE014134-1722|AAF52827.1|  190|Drosophila melanogaster CG5885-PA...   120   2e-27
BT025089-1|ABE73260.1|  764|Drosophila melanogaster IP13014p pro...    30   3.2  
AE014135-160|AAF59397.2|  333|Drosophila melanogaster CG11093-PA...    30   3.2  

>AY118492-1|AAM49861.1|  190|Drosophila melanogaster LD05267p
           protein.
          Length = 190

 Score =  120 bits (289), Expect = 2e-27
 Identities = 54/87 (62%), Positives = 69/87 (79%)
 Frame = +3

Query: 249 LVILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERIL 428
           L +LVTAAST+L+A AY+N KFQLKH             ++R++ DDKK++RKEKDERIL
Sbjct: 66  LFVLVTAASTYLMATAYKNIKFQLKHKIAGRREEAVTREVNRQVGDDKKVTRKEKDERIL 125

Query: 429 WKKNEVADYEATTYSIFYNNALFLTIV 509
           WKKNEVADYEATT+SIFYNNA++L ++
Sbjct: 126 WKKNEVADYEATTFSIFYNNAIYLAVI 152



 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 45/58 (77%), Positives = 51/58 (87%), Gaps = 4/58 (6%)
 Frame = +1

Query: 73  SGKNNKA----FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEI 234
           SGK  K     FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSA+PIWLFWR+H++++
Sbjct: 3   SGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLFWRIHNMDL 60


>AE014134-1722|AAF52827.1|  190|Drosophila melanogaster CG5885-PA
           protein.
          Length = 190

 Score =  120 bits (289), Expect = 2e-27
 Identities = 54/87 (62%), Positives = 69/87 (79%)
 Frame = +3

Query: 249 LVILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERIL 428
           L +LVTAAST+L+A AY+N KFQLKH             ++R++ DDKK++RKEKDERIL
Sbjct: 66  LFVLVTAASTYLMATAYKNIKFQLKHKIAGRREEAVTREVNRQVGDDKKVTRKEKDERIL 125

Query: 429 WKKNEVADYEATTYSIFYNNALFLTIV 509
           WKKNEVADYEATT+SIFYNNA++L ++
Sbjct: 126 WKKNEVADYEATTFSIFYNNAIYLAVI 152



 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 45/58 (77%), Positives = 51/58 (87%), Gaps = 4/58 (6%)
 Frame = +1

Query: 73  SGKNNKA----FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEI 234
           SGK  K     FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSA+PIWLFWR+H++++
Sbjct: 3   SGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLFWRIHNMDL 60


>BT025089-1|ABE73260.1|  764|Drosophila melanogaster IP13014p
           protein.
          Length = 764

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 678 CLKCLILKLFVSRGALNFHLHLVPVESRARSPDAA 574
           C+KC    +F S     FH H +    R   PDAA
Sbjct: 156 CIKCSYCGMFFSPNKFIFHSHRITTNDRYVQPDAA 190


>AE014135-160|AAF59397.2|  333|Drosophila melanogaster CG11093-PA
           protein.
          Length = 333

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 678 CLKCLILKLFVSRGALNFHLHLVPVESRARSPDAA 574
           C+KC    +F S     FH H +    R   PDAA
Sbjct: 156 CIKCSYCGMFFSPNKFIFHSHRITTNDRYVQPDAA 190


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,562,034
Number of Sequences: 53049
Number of extensions: 728241
Number of successful extensions: 1532
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)