Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00070
         (804 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical ...    74   1e-13
AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine re...    31   0.73 
Z78546-1|CAB01769.1|  364|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL034364-2|CAA22252.1|  630|Caenorhabditis elegans Hypothetical ...    29   3.9  
U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical...    28   6.8  
AF039049-7|AAB94243.2|  300|Caenorhabditis elegans Serpentine re...    28   9.0  

>AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.2 protein.
          Length = 178

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 38/84 (45%), Positives = 53/84 (63%)
 Frame = +3

Query: 258 LVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERILWKK 437
           L    + +LL+LA +N K  LKH             +S + A DKKM+ KEK+ER L++K
Sbjct: 59  LSAVGTAYLLSLACKNQKCLLKHQIVMKRGSAVEREISGQYAADKKMTVKEKEERALFRK 118

Query: 438 NEVADYEATTYSIFYNNALFLTIV 509
           NEVAD E+T  S+FY N+L+LTI+
Sbjct: 119 NEVADTESTYLSVFYTNSLYLTIM 142



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
 Frame = +1

Query: 97  TKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEI-STAIIW 252
           TKEEELLL  +S   STK +  FY NA I+S  P++LF+ VH +EI  + ++W
Sbjct: 5   TKEEELLLSSYSATSSTKGNLFFYLNALIISIAPLYLFYGVHQMEIQDSLVVW 57


>AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein132 protein.
          Length = 367

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
 Frame = +3

Query: 390 KKMSRKEKDERILWKKNEVADYEATTYSIFYNNALFLTI-----VS*AVSTFCVHS-HLQ 551
           K++ + EK  ++    N+  DY  TT  +FYN   F        VS A++ F + +  LQ
Sbjct: 246 KEIRKAEKRRKVSTSFNKTKDYRRTTQLVFYNTIFFFVAEFPLGVSIAITWFFIDTPGLQ 305

Query: 552 LITL 563
           LI L
Sbjct: 306 LIFL 309


>Z78546-1|CAB01769.1|  364|Caenorhabditis elegans Hypothetical
           protein T21H8.3 protein.
          Length = 364

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 717 YTHNSFIFLIATVCLKCLILKLFVSRGALNFHLHLV 610
           Y H++ +FL+A     CLIL    +  A NF + L+
Sbjct: 46  YYHSNLLFLVALNAASCLILAGLTAWSATNFFVQLI 81


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 390 KKMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 497
           K+M +  +++R L    +  DY  TT  +FYN   F
Sbjct: 306 KEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 341


>Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical
           protein M01G12.4 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 390 KKMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 497
           K+M +  +++R L    +  DY  TT  +FYN   F
Sbjct: 239 KEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 274


>Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical
           protein ZK1058.3 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/53 (24%), Positives = 21/53 (39%)
 Frame = +1

Query: 55  TYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFW 213
           T  +K      K F K  +++L D+    + K   +   N      +P W FW
Sbjct: 178 TLPMKKHESQKKHFEKHGKVMLMDYLEQETLKKERIIMRNEHWTWLVPYWAFW 230


>AL034364-2|CAA22252.1|  630|Caenorhabditis elegans Hypothetical
           protein W06D4.4 protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +1

Query: 109 ELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAIIWLS 258
           E+L       VS++   +   N    +AIP+W+ W    + +ST ++ +S
Sbjct: 530 EILRFPIDGRVSSQKCVVNIDNMSSSNAIPMWMEWEFGGINLSTGLLSIS 579


>U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical
           protein F37A4.3 protein.
          Length = 229

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = +3

Query: 393 KMSRKEKDERILWKKNEVADYEATTYSIFYNNALFLTIVS 512
           ++ +  +++++ W     A+YEA  +  ++N +LFLT+ S
Sbjct: 15  RVGKLMRNDKLAWS----AEYEAKKFKFYHNTSLFLTLQS 50


>Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical
           protein C26D10.4 protein.
          Length = 839

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 591 LLYSPQEPSEDGSLMRHVIQTVLILNILDILWQLK 695
           L+Y   +PSE GSL+   I ++   NILDI  +L+
Sbjct: 552 LIYRHDKPSEAGSLVCACIVSLGFTNILDIFEKLQ 586


>AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical
           protein Y57A10A.27 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +1

Query: 37  FVKVKVTYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSAL 162
           F+KV +T L +    + K+  K  ELL++   R  STK+SAL
Sbjct: 10  FLKVDLTRLAEDDETHQKSTKKHTELLIELIDRK-STKASAL 50


>AF039049-7|AAB94243.2|  300|Caenorhabditis elegans Serpentine
           receptor, class x protein63 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
 Frame = -2

Query: 503 SQEKCVIVEN*V-----CGSFI--ICHLILFPQDSFVLFFSAHFFIISKLPGHFTGNSIL 345
           SQ KC+I+ + +      G F   ICH     Q  F+ F ++   +I    G F  NS++
Sbjct: 118 SQTKCLILVSWMYSLTYAGLFYLRICHFRFDEQVQFLTFSNSRICMIVGWNGDFIKNSVI 177

Query: 344 PAHSNTVLQLELSVTVGKSQQ 282
            A    ++ L  +VT+ KS+Q
Sbjct: 178 VA----IIMLLDTVTIMKSRQ 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,142,595
Number of Sequences: 27780
Number of extensions: 383174
Number of successful extensions: 939
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)