Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00069
(498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 96 5e-20
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 96 5e-20
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 96 5e-20
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 96 5e-20
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 96 5e-20
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 96 5e-20
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 96 5e-20
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 96 5e-20
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 33 0.55
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 33 0.55
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 33 0.55
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 33 0.55
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 31 1.7
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 31 1.7
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 31 1.7
AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein pr... 31 2.2
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 30 3.9
BT007364-1|AAP36028.1| 299|Homo sapiens cone-rod homeobox protein. 30 5.1
BC053672-1|AAH53672.1| 299|Homo sapiens CRX protein protein. 30 5.1
BC016664-1|AAH16664.1| 299|Homo sapiens CRX protein protein. 30 5.1
AF024711-1|AAB88418.1| 299|Homo sapiens cone rod homeobox prote... 30 5.1
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 96.3 bits (229), Expect = 5e-20
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = +1
Query: 49 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 228
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 229 KLSSMPVGG 255
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 96.3 bits (229), Expect = 5e-20
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = +1
Query: 49 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 228
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 229 KLSSMPVGG 255
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 96.3 bits (229), Expect = 5e-20
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = +1
Query: 49 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 228
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 229 KLSSMPVGG 255
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 96.3 bits (229), Expect = 5e-20
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = +1
Query: 49 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 228
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 229 KLSSMPVGG 255
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 96.3 bits (229), Expect = 5e-20
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = +1
Query: 49 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 228
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 229 KLSSMPVGG 255
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 96.3 bits (229), Expect = 5e-20
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = +1
Query: 49 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 228
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 229 KLSSMPVGG 255
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 96.3 bits (229), Expect = 5e-20
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = +1
Query: 49 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 228
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 229 KLSSMPVGG 255
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 96.3 bits (229), Expect = 5e-20
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = +1
Query: 49 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 228
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 229 KLSSMPVGG 255
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 33.1 bits (72), Expect = 0.55
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 254 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 78
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 77 ASKYAA 60
+ +A+
Sbjct: 723 SHTHAS 728
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 33.1 bits (72), Expect = 0.55
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 254 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 78
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 77 ASKYAA 60
+ +A+
Sbjct: 723 SHTHAS 728
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 33.1 bits (72), Expect = 0.55
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 254 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 78
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 141 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 200
Query: 77 ASKYAA 60
+ +A+
Sbjct: 201 SHTHAS 206
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 33.1 bits (72), Expect = 0.55
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 254 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 78
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 301 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 360
Query: 77 ASKYAA 60
+ +A+
Sbjct: 361 SHTHAS 366
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 31.5 bits (68), Expect = 1.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 88 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 246
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 818
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 31.5 bits (68), Expect = 1.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 88 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 246
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 946
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 31.5 bits (68), Expect = 1.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 88 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 246
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 525
>AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein
protein.
Length = 264
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 95 PRQLPLTLRRS-----SAPSVSKLTVRSLRK*SLSSTARMLNNLLRPDVRSC 235
P QLPL+LRR S PS S +RSL S +S++R + RSC
Sbjct: 66 PAQLPLSLRRRCSRPRSRPSSSSRAIRSLWSRSRTSSSRWFTSDTSSSSRSC 117
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 112 DVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGE 258
DV ++ S G+E ++ + +G++V ++ A+G LS +P GGE
Sbjct: 1390 DVSELPSGEGLETSASGVEDLSRLPSGEEVLEISASGFGDLSGVPSGGE 1438
>BT007364-1|AAP36028.1| 299|Homo sapiens cone-rod homeobox protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.1
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -2
Query: 260 CSPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPS 81
C P GI DS+S P + + P ++V T +SP++ P + A+G P
Sbjct: 132 CPDPLGISDSYSPP--LPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVASG---PSL 186
Query: 80 TASKYAAT 57
T++ YA T
Sbjct: 187 TSAPYAMT 194
>BC053672-1|AAH53672.1| 299|Homo sapiens CRX protein protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.1
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -2
Query: 260 CSPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPS 81
C P GI DS+S P + + P ++V T +SP++ P + A+G P
Sbjct: 132 CPDPLGISDSYSPP--LPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVASG---PSL 186
Query: 80 TASKYAAT 57
T++ YA T
Sbjct: 187 TSAPYAMT 194
>BC016664-1|AAH16664.1| 299|Homo sapiens CRX protein protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.1
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -2
Query: 260 CSPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPS 81
C P GI DS+S P + + P ++V T +SP++ P + A+G P
Sbjct: 132 CPDPLGISDSYSPP--LPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVASG---PSL 186
Query: 80 TASKYAAT 57
T++ YA T
Sbjct: 187 TSAPYAMT 194
>AF024711-1|AAB88418.1| 299|Homo sapiens cone rod homeobox protein
protein.
Length = 299
Score = 29.9 bits (64), Expect = 5.1
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -2
Query: 260 CSPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPS 81
C P GI DS+S P + + P ++V T +SP++ P + A+G P
Sbjct: 132 CPDPLGISDSYSPP--LPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVASG---PSL 186
Query: 80 TASKYAAT 57
T++ YA T
Sbjct: 187 TSAPYAMT 194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,278,727
Number of Sequences: 237096
Number of extensions: 784804
Number of successful extensions: 2268
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2266
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -