Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00068
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.7  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.7  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   8.7  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = +2

Query: 425 YCLRYNYF*VTTFSKEMLHFDVLYNISQLLTLITLYLWC 541
           YC  Y    VTTF K      +L N+     +     +C
Sbjct: 76  YCFNYYVIVVTTFYKRRTWTRLLKNLESCAKIKKTKRYC 114


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 282 EWITPFQRISC 314
           +W++PF R+ C
Sbjct: 140 DWMSPFDRVVC 150


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 282 EWITPFQRISC 314
           +W++PF R+ C
Sbjct: 199 DWMSPFDRVVC 209


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 282 EWITPFQRISC 314
           +W++PF R+ C
Sbjct: 140 DWMSPFDRVVC 150


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 282 EWITPFQRISC 314
           +W++PF R+ C
Sbjct: 199 DWMSPFDRVVC 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,830
Number of Sequences: 336
Number of extensions: 3484
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)