Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00067
(794 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 29 0.066
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 25 1.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 25 1.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.5
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 4.3
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 5.7
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 22 5.7
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 5.7
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 22 5.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 7.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 7.5
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 10.0
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 10.0
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 28.7 bits (61), Expect = 0.066
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 617 ASSQQCCWK*LVYVVHSAWRIHVCILTHGHSLSWGIPSN 501
A++ CW + Y+V AW I ++ L WG +N
Sbjct: 65 AAAVMSCWMNVYYIVILAWAIFYFFMSMRSELPWGSCNN 103
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 771 PRRIMNGLLAPTTSWIVQFEG 709
P +I+NG P T+W+ F G
Sbjct: 150 PGKIVNGKRVPPTNWVGVFGG 170
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 771 PRRIMNGLLAPTTSWIVQFEG 709
P +I+NG P T+W+ F G
Sbjct: 150 PGKIVNGKRVPPTNWVGVFGG 170
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -1
Query: 599 CWK*LVYVVHSAWRIHVCILTHGHSLSW---GIPSNVR 495
CW + Y++ AW + +++ L W G P N R
Sbjct: 109 CWTNIYYIIILAWALFYLLVSLRIDLPWRTCGNPWNTR 146
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -1
Query: 599 CWK*LVYVVHSAWRIHVCILTHGHSLSW---GIPSNVR 495
CW + Y++ AW + +++ L W G P N R
Sbjct: 162 CWTNIYYIIILAWALFYLLVSLRIDLPWRTCGNPWNTR 199
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 677 SPTVKISWMSP 645
S T++ISWMSP
Sbjct: 1095 SQTIRISWMSP 1105
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 752 VFLRQPPVGLFNLKG 708
+F PP G FN+KG
Sbjct: 225 LFYPYPPYGTFNIKG 239
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 190 YAKEAFFCHQEEEGNLQEG*TVVKEYRIKERDEIR 294
YA + FF ++ L+ + EYR+ E D ++
Sbjct: 82 YAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLK 116
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 174 LGDYRLR*RGVLLPSRRRGKSS 239
+ DY++ + +LLP R GKS+
Sbjct: 128 VADYKIEGKVLLLPVRGAGKSN 149
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 364 RIRGINQVSPKSVKFCNCLDC 426
+ GI+ +P C+CLDC
Sbjct: 312 KYEGISS-TPSQASSCSCLDC 331
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 600 LLEVIGIRCPLSLAN 556
++E+IGI C L LAN
Sbjct: 206 IVELIGIICALCLAN 220
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 7.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 775 SPPSNNEWSSCANHQLD 725
SPP N +WS+ H ++
Sbjct: 57 SPPLNIDWSTADGHPVN 73
Score = 21.4 bits (43), Expect = 10.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 772 PPSNNEWSSCANHQLDCSI*RATGN 698
PPS E+S+ + LDC+ ATG+
Sbjct: 36 PPSRVEFSNSSGAWLDCT---ATGS 57
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 7.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 775 SPPSNNEWSSCANHQLD 725
SPP N +WS+ H ++
Sbjct: 57 SPPLNIDWSTADGHPVN 73
Score = 21.4 bits (43), Expect = 10.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 772 PPSNNEWSSCANHQLDCSI*RATGN 698
PPS E+S+ + LDC+ ATG+
Sbjct: 36 PPSRVEFSNSSGAWLDCT---ATGS 57
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 10.0
Identities = 12/47 (25%), Positives = 19/47 (40%)
Frame = +3
Query: 360 HPNPWYQPSFTEVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 500
H W Q F ++ + + N G+ RL T + RI + Y
Sbjct: 2 HHRMWLQQIFILLQMIHLIAWASLENTGISDRLENVTQTISRILDGY 48
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 765 RIMNGLLAPTTSWIVQFEG 709
RI+NG P +W+ F G
Sbjct: 152 RIVNGTRQPPNNWLSVFWG 170
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,107
Number of Sequences: 438
Number of extensions: 4960
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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