Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00065
         (821 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    27   0.18 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.73 
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   6.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   6.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 552 LHRPHILKYIWQYFVLNRHHWYW 484
           L   H L Y  +   +N HHW+W
Sbjct: 188 LEEEHRLAYFREDLGINLHHWHW 210


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 552 LHRPHILKYIWQYFVLNRHHWYW 484
           L   H + Y  +   LN HHW+W
Sbjct: 188 LDEEHRVAYWREDIGLNLHHWHW 210


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 211 WCSRRSWKS 185
           WC RR W S
Sbjct: 119 WCPRREWSS 127


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 211 WCSRRSWKS 185
           WC RR W S
Sbjct: 275 WCPRREWSS 283


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 349  GLFRCHLCT 323
            GLF+C LCT
Sbjct: 1115 GLFKCMLCT 1123


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 349  GLFRCHLCT 323
            GLF+C LCT
Sbjct: 1115 GLFKCMLCT 1123


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 349  GLFRCHLCT 323
            GLF+C LCT
Sbjct: 1115 GLFKCMLCT 1123


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 349  GLFRCHLCT 323
            GLF+C LCT
Sbjct: 1115 GLFKCMLCT 1123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,907
Number of Sequences: 336
Number of extensions: 4573
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)