Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00064
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    26   0.39 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          26   0.39 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.1  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   2.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.4  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   8.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.4  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +1

Query: 574 PLLQLRAQESESLYSSLDRVTGIRDAFLKISKTD-NY---PTLAPERPEISLTTSIDNPP 741
           P+      E+++L   +   +GI    +  S+ + +Y   P   P++ E+SL+ +  + P
Sbjct: 15  PVFNNYMDENQALGFKISDNSGINSQMIDYSRPNWSYLRTPQFEPQQFEVSLSENRSHEP 74

Query: 742 ETEQP 756
           E E+P
Sbjct: 75  EMERP 79


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +1

Query: 574 PLLQLRAQESESLYSSLDRVTGIRDAFLKISKTD-NY---PTLAPERPEISLTTSIDNPP 741
           P+      E+++L   +   +GI    +  S+ + +Y   P   P++ E+SL+ +  + P
Sbjct: 35  PVFNNYMDENQALGFKISDNSGINSQMIDYSRPNWSYLRTPQFEPQQFEVSLSENRSHEP 94

Query: 742 ETEQP 756
           E E+P
Sbjct: 95  EMERP 99


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 659 FKNASRIPVTRSSEL*RDSDSCARNCSSGLRQQPIVFQFHLLLFL 525
           F+N++   + ++  L    D CAR C  G  + P +  +H  L L
Sbjct: 88  FRNSATAELLKNPSL-SSPDECARACREG--EPPRICYYHFTLEL 129


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 659 FKNASRIPVTRSSEL*RDSDSCARNCSSGLRQQPIVFQFHLLLFL 525
           F+N++   + ++  L    D CAR C  G  + P +  +H  L L
Sbjct: 88  FRNSATAELLKNPSL-SSPDECARACREG--EPPRICYYHFTLEL 129


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/47 (21%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 133 CLNCVSKM-DYDVVEGKIPRDLLEYDFAEDAMDFECQLAESQT*ILR 270
           C  C   + D D+++  +P+++L+ +       +   L E  + +LR
Sbjct: 105 CKTCPGDLYDSDIIQDIVPQNVLDEEEKSSTKHYAALLTERSSLVLR 151


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +2

Query: 437 EEHTSPREMGS*RNNGIQAIPVQSNKQFTIEIVVDETETLWAVDGDHYCSY 589
           E   S   M + R +GIQ  P   +K+   + + D  +  + V+G +Y  Y
Sbjct: 155 EVDESASVMTNGRIHGIQPSPTLPSKEEVSKKIDDNQKVGYVVEGRNYRKY 205


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 655 LKISKTDNYPTLAPERPEISLTTSIDNPPE 744
           LK ++   YP   P+   +S    + NPP+
Sbjct: 260 LKNNRASPYPMQRPKSASLSPPPHVYNPPD 289


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 169 VEGKIPRDLLEYDFAEDAMD 228
           V+  +P  +L +DF ED+++
Sbjct: 597 VQVMVPPQILPFDFGEDSIN 616


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 92  CVLEGLKNCWFLTFC 48
           CV+EG  +CW    C
Sbjct: 484 CVVEGNPHCWVPHSC 498


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 664 SKTDNYPTLAPERPEIS 714
           ++++ YPT  P RP ++
Sbjct: 374 ARSNKYPTRVPHRPYVA 390


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -1

Query: 353 YCEPWY 336
           YC+PWY
Sbjct: 33  YCDPWY 38


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 435 VRNTRRRGKWGPEETTA 485
           V+ T + G+W PE++T+
Sbjct: 427 VQTTPKPGQWVPEKSTS 443


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 538 YYYFYRKLLVTLNGYSLY 485
           + YF RK+L+ +  Y LY
Sbjct: 206 FEYFQRKILLMIQLYYLY 223


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 538 YYYFYRKLLVTLNGYSLY 485
           + YF RK+L+ +  Y LY
Sbjct: 132 FEYFQRKILLMIQLYYLY 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,169
Number of Sequences: 336
Number of extensions: 3836
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)