Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00064
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   1.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   4.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   5.6  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   9.8  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 427 HCGCRTLKCTEMSERPASNSSLPMFIANHGMSS-LGVPVQIICEPIVK 287
           H G +  KCT   E   S  ++ + I  H  SS +G P     EP ++
Sbjct: 254 HYGEKVYKCTLCHETFGSKKTMELHIKTHSDSSVVGSPRDSPIEPEIE 301


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +1

Query: 607  SLYSSLDRVTGIRDAFLKISKTDNYPTLAPERPEISLTTSI 729
            +L  +LD++    D   KI++      LAP+  +++  TS+
Sbjct: 887  NLTQTLDKLIRSPDTLRKIAQNRGTNPLAPDAVDLTQLTSV 927


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 96  EEIEKFCKKNNE 131
           EEI  FC KNN+
Sbjct: 332 EEINTFCPKNNK 343


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 527 EIVVDETETLWAVD 568
           +I +DE E LW +D
Sbjct: 131 KIAIDEYERLWVLD 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,410
Number of Sequences: 438
Number of extensions: 4335
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)