BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00062
(782 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ302660-1|CAC35525.1| 195|Anopheles gambiae hypothetical prote... 26 1.5
EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein. 24 6.1
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 24 6.1
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 24 6.1
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 24 6.1
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 24 6.1
AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeo... 23 8.1
>AJ302660-1|CAC35525.1| 195|Anopheles gambiae hypothetical protein
protein.
Length = 195
Score = 25.8 bits (54), Expect = 1.5
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 299 PTGFPSCLWTTATLPVTSETAALKLLPSARGRSVS--GALQTSPGL 430
P FP+ TT TL TS TAA ++ SV+ + TS GL
Sbjct: 31 PWSFPALSPTTTTLATTSGTAASSGASNSSNVSVAIGNRVNTSTGL 76
>EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein.
Length = 481
Score = 23.8 bits (49), Expect = 6.1
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 618 SLIDLASAKTI--FVLNSVWVFKSAGSSYPAP*YKP 517
S + L +A+T+ F N+ + F++ YP P Y P
Sbjct: 28 SSLCLTTAQTVQQFAYNTDFFFRNPSEIYPQPVYVP 63
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 23.8 bits (49), Expect = 6.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 583 KNGLCRRKVNQRSLVQLGYGRRL 651
K+ R KVN +S + LGY ++L
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQKL 250
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 23.8 bits (49), Expect = 6.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 583 KNGLCRRKVNQRSLVQLGYGRRL 651
K+ R KVN +S + LGY ++L
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQKL 250
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 23.8 bits (49), Expect = 6.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 583 KNGLCRRKVNQRSLVQLGYGRRL 651
K+ R KVN +S + LGY ++L
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQKL 250
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 23.8 bits (49), Expect = 6.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 362 PPSLM*LEVSLSSTDTTGILLGICFPLLWPLLTSANVR 249
PP + L + L+ +L+G+ LLW +LTS + R
Sbjct: 763 PPKVFMLGIVLAVIAVV-VLIGMAVLLLWKVLTSIHDR 799
>AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeotic
protein protein.
Length = 324
Score = 23.4 bits (48), Expect = 8.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 45 KNGKPPLSQTTTQMRTCCIHTPQY 116
+NG PPL Q M T + PQ+
Sbjct: 140 ENGSPPLDQMGHHMGTAQMTIPQH 163
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,332
Number of Sequences: 2352
Number of extensions: 17156
Number of successful extensions: 104
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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