Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00061
(775 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC142619-1|AAI42620.1| 772|Homo sapiens LAMB4 protein protein. 31 3.5
BC112935-1|AAI12936.1| 1699|Homo sapiens QSER1 protein protein. 31 3.5
AK126023-1|BAC86397.1| 1315|Homo sapiens protein ( Homo sapiens ... 31 3.5
AK025577-1|BAB15176.1| 724|Homo sapiens protein ( Homo sapiens ... 31 3.5
AF172277-3|AAF22284.1| 761|Homo sapiens laminin beta 1 related ... 31 3.5
AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain pr... 31 3.5
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 31 4.6
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 31 4.6
Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain prot... 30 8.0
S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain prot... 30 8.0
>BC142619-1|AAI42620.1| 772|Homo sapiens LAMB4 protein protein.
Length = 772
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -1
Query: 658 LWGNNCHGCQHSTQNTHMYICVKLFHLIPLG*ISVIMLC 542
L G C CQH+T+ H C LF+ PL IS C
Sbjct: 354 LSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYAC 392
>BC112935-1|AAI12936.1| 1699|Homo sapiens QSER1 protein protein.
Length = 1699
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 526 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNYYPI-TEILDRNPRTDSKEI 702
+WK+ KALLQKF+P +G+ T Y G+ D + Y I + ++ + + +
Sbjct: 1383 IWKVQ-KALLQKFVPEIRDGQREFAATNSYLGYFGDAKSKYKRIYVKFIENANKKEYVRV 1441
Query: 703 C 705
C
Sbjct: 1442 C 1442
>AK126023-1|BAC86397.1| 1315|Homo sapiens protein ( Homo sapiens cDNA
FLJ44035 fis, clone TESTI4028612. ).
Length = 1315
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 526 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNYYPI-TEILDRNPRTDSKEI 702
+WK+ KALLQKF+P +G+ T Y G+ D + Y I + ++ + + +
Sbjct: 1144 IWKVQ-KALLQKFVPEIRDGQREFAATNSYLGYFGDAKSKYKRIYVKFIENANKKEYVRV 1202
Query: 703 C 705
C
Sbjct: 1203 C 1203
>AK025577-1|BAB15176.1| 724|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21924 fis, clone HEP04086. ).
Length = 724
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 526 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNYYPI-TEILDRNPRTDSKEI 702
+WK+ KALLQKF+P +G+ T Y G+ D + Y I + ++ + + +
Sbjct: 348 IWKVQ-KALLQKFVPEIRDGQREFAATNSYLGYFGDAKSKYKRIYVKFIENANKKEYVRV 406
Query: 703 C 705
C
Sbjct: 407 C 407
>AF172277-3|AAF22284.1| 761|Homo sapiens laminin beta 1 related
protein protein.
Length = 761
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -1
Query: 658 LWGNNCHGCQHSTQNTHMYICVKLFHLIPLG*ISVIMLC 542
L G C CQH+T+ H C LF+ PL IS C
Sbjct: 342 LSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYAC 380
>AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain
precursor protein.
Length = 1761
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -1
Query: 658 LWGNNCHGCQHSTQNTHMYICVKLFHLIPLG*ISVIMLC 542
L G C CQH+T+ H C LF+ PL IS C
Sbjct: 354 LSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYAC 392
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 526 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNYYPI-TEILDRNPRTDSKEI 702
+W++ KALLQKF P +G+ T Y G+ D ++ Y + + L+ + D +
Sbjct: 239 IWRVQ-KALLQKFTPEIKDGQRQFCATSNYLGYFGDAKNRYQRLYVKFLENVNKKDYVRV 297
Query: 703 C 705
C
Sbjct: 298 C 298
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 526 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNYYPI-TEILDRNPRTDSKEI 702
+W++ KALLQKF P +G+ T Y G+ D ++ Y + + L+ + D +
Sbjct: 784 IWRVQ-KALLQKFTPEIKDGQRQFCATSNYLGYFGDAKNRYQRLYVKFLENVNKKDYVRV 842
Query: 703 C 705
C
Sbjct: 843 C 843
>Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain
protein.
Length = 1798
Score = 30.3 bits (65), Expect = 8.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 652 GNNCHGCQHSTQNTHMYICVKLFHLIP 572
G C GCQH+T H +C F+ P
Sbjct: 371 GGVCDGCQHNTAGRHCELCRPFFYRDP 397
>S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain
protein.
Length = 1798
Score = 30.3 bits (65), Expect = 8.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 652 GNNCHGCQHSTQNTHMYICVKLFHLIP 572
G C GCQH+T H +C F+ P
Sbjct: 371 GGVCDGCQHNTAGRHCELCRPFFYRDP 397
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,771,563
Number of Sequences: 237096
Number of extensions: 2105123
Number of successful extensions: 4191
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4191
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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