Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00061
         (775 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060466-1|AAL25505.1|  626|Drosophila melanogaster SD04853p pro...    42   7e-04
AE014296-3304|AAN11624.1|  981|Drosophila melanogaster CG17233-P...    42   7e-04
AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-P...    42   7e-04
AE014296-3302|AAN11623.1| 1173|Drosophila melanogaster CG17233-P...    42   7e-04
AY075532-1|AAL68339.1|  844|Drosophila melanogaster RH06639p pro...    29   9.4  
AE014134-2430|ABC65898.1|  844|Drosophila melanogaster CG17988-P...    29   9.4  

>AY060466-1|AAL25505.1|  626|Drosophila melanogaster SD04853p
           protein.
          Length = 626

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 526 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNY 648
           +W++D K +LQK+ P   NG+  ++    Y+ WN++ +  Y
Sbjct: 333 IWQVDSKCILQKYEPFRQNGKTFYRNMSKYASWNLETKKLY 373



 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 168 FQDSGED--WTPDADSNEPASRTGRKRVSKAR*TTPKRNVKTH 290
           F DS  D  WTP  + ++     G++++++    TP++N   H
Sbjct: 200 FTDSDTDPVWTPQEEDSDDGKGYGKRKLARRSKGTPRKNTYDH 242


>AE014296-3304|AAN11624.1|  981|Drosophila melanogaster CG17233-PB,
           isoform B protein.
          Length = 981

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 526 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNY 648
           +W++D K +LQK+ P   NG+  ++    Y+ WN++ +  Y
Sbjct: 688 IWQVDSKCILQKYEPFRQNGKTFYRNMSKYASWNLETKKLY 728



 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 168 FQDSGED--WTPDADSNEPASRTGRKRVSKAR*TTPKRNVKTH 290
           F DS  D  WTP  + ++     G++++++    TP++N   H
Sbjct: 555 FTDSDTDPVWTPQEEDSDDGKGYGKRKLARRSKGTPRKNTYDH 597


>AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-PC,
            isoform C protein.
          Length = 1465

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 526  LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNY 648
            +W++D K +LQK+ P   NG+  ++    Y+ WN++ +  Y
Sbjct: 1172 IWQVDSKCILQKYEPFRQNGKTFYRNMSKYASWNLETKKLY 1212



 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 168  FQDSGED--WTPDADSNEPASRTGRKRVSKAR*TTPKRNVKTH 290
            F DS  D  WTP  + ++     G++++++    TP++N   H
Sbjct: 1039 FTDSDTDPVWTPQEEDSDDGKGYGKRKLARRSKGTPRKNTYDH 1081


>AE014296-3302|AAN11623.1| 1173|Drosophila melanogaster CG17233-PA,
            isoform A protein.
          Length = 1173

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 526  LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNY 648
            +W++D K +LQK+ P   NG+  ++    Y+ WN++ +  Y
Sbjct: 880  IWQVDSKCILQKYEPFRQNGKTFYRNMSKYASWNLETKKLY 920



 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 168 FQDSGED--WTPDADSNEPASRTGRKRVSKAR*TTPKRNVKTH 290
           F DS  D  WTP  + ++     G++++++    TP++N   H
Sbjct: 747 FTDSDTDPVWTPQEEDSDDGKGYGKRKLARRSKGTPRKNTYDH 789


>AY075532-1|AAL68339.1|  844|Drosophila melanogaster RH06639p
           protein.
          Length = 844

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 532 KIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVD 633
           ++DG AL + F P+E   R  +  T  Y GWN D
Sbjct: 763 RLDGTALREYFAPLEEWLRQENLRTNEYVGWNYD 796


>AE014134-2430|ABC65898.1|  844|Drosophila melanogaster CG17988-PB
           protein.
          Length = 844

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 532 KIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVD 633
           ++DG AL + F P+E   R  +  T  Y GWN D
Sbjct: 763 RLDGTALREYFAPLEEWLRQENLRTNEYVGWNYD 796


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,570,198
Number of Sequences: 53049
Number of extensions: 627756
Number of successful extensions: 1641
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1641
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)