Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00060
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 42 4e-04
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 42 4e-04
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 42 4e-04
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 42 4e-04
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 39 0.004
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 39 0.004
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 39 0.004
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 37 0.020
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 36 0.026
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 36 0.026
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 35 0.060
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 35 0.060
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 35 0.060
U51995-6|AAA96074.1| 430|Caenorhabditis elegans Hypothetical pr... 33 0.32
Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical pr... 32 0.56
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 29 3.0
AF045640-2|AAM81123.1| 185|Caenorhabditis elegans Hypothetical ... 29 3.0
AF003145-9|AAT68904.1| 585|Caenorhabditis elegans Hypothetical ... 29 3.9
AF003145-8|AAB57721.2| 700|Caenorhabditis elegans Hypothetical ... 29 3.9
Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr... 28 9.0
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 512 ISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGN 691
+ +E+RPR G+L SV G +Y+ +E ++ + VE+G+G + ++ CDG
Sbjct: 3513 LEVEMRPRMKNGILFSV-GVLEYITVEFVNGSIKTTVESGSGGEELWHHPDIENQYCDGQ 3571
Query: 692 W 694
W
Sbjct: 3572 W 3572
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 46 FLAFFMRDAKLHYMFNCGGETGV-ISSTHTYNDIDWHTVTLKRNGGHGKLAVDSE 207
F+A + D + + G G I+ + YND WHTV++ R H K+ +D E
Sbjct: 2944 FMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSIVREEKHVKIMIDGE 2998
Score = 36.3 bits (80), Expect = 0.026
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +2
Query: 512 ISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGN 691
IS+ + GLL V KD+M LEL D V +V+ G+G + + SN + DG
Sbjct: 2922 ISLSFLTFSPHGLLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESSNYN---DGK 2978
Query: 692 WHKI 703
WH +
Sbjct: 2979 WHTV 2982
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 512 ISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGN 691
+ +E+RPR G+L SV G +Y+ +E ++ + VE+G+G + ++ CDG
Sbjct: 3545 LEVEMRPRMKNGILFSV-GVLEYITVEFVNGSIKTTVESGSGGEELWHHPDIENQYCDGQ 3603
Query: 692 W 694
W
Sbjct: 3604 W 3604
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 46 FLAFFMRDAKLHYMFNCGGETGV-ISSTHTYNDIDWHTVTLKRNGGHGKLAVDSE 207
F+A + D + + G G I+ + YND WHTV++ R H K+ +D E
Sbjct: 2944 FMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSIVREEKHVKIMIDGE 2998
Score = 36.3 bits (80), Expect = 0.026
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +2
Query: 512 ISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGN 691
IS+ + GLL V KD+M LEL D V +V+ G+G + + SN + DG
Sbjct: 2922 ISLSFLTFSPHGLLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESSNYN---DGK 2978
Query: 692 WHKI 703
WH +
Sbjct: 2979 WHTV 2982
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 512 ISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGN 691
+ +E+RPR G+L SV G +Y+ +E ++ + VE+G+G + ++ CDG
Sbjct: 1359 LEVEMRPRMKNGILFSV-GVLEYITVEFVNGSIKTTVESGSGGEELWHHPDIENQYCDGQ 1417
Query: 692 W 694
W
Sbjct: 1418 W 1418
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 46 FLAFFMRDAKLHYMFNCGGETGV-ISSTHTYNDIDWHTVTLKRNGGHGKLAVDSE 207
F+A + D + + G G I+ + YND WHTV++ R H K+ +D E
Sbjct: 758 FMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSIVREEKHVKIMIDGE 812
Score = 36.3 bits (80), Expect = 0.026
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +2
Query: 512 ISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGN 691
IS+ + GLL V KD+M LEL D V +V+ G+G + + SN + DG
Sbjct: 736 ISLSFLTFSPHGLLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESSNYN---DGK 792
Query: 692 WHKI 703
WH +
Sbjct: 793 WHTV 796
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 512 ISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGN 691
+ +E+RPR G+L SV G +Y+ +E ++ + VE+G+G + ++ CDG
Sbjct: 3545 LEVEMRPRMKNGILFSV-GVLEYITVEFVNGSIKTTVESGSGGEELWHHPDIENQYCDGQ 3603
Query: 692 W 694
W
Sbjct: 3604 W 3604
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 46 FLAFFMRDAKLHYMFNCGGETGV-ISSTHTYNDIDWHTVTLKRNGGHGKLAVDSE 207
F+A + D + + G G I+ + YND WHTV++ R H K+ +D E
Sbjct: 2944 FMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSIVREEKHVKIMIDGE 2998
Score = 36.3 bits (80), Expect = 0.026
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +2
Query: 512 ISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGN 691
IS+ + GLL V KD+M LEL D V +V+ G+G + + SN + DG
Sbjct: 2922 ISLSFLTFSPHGLLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESSNYN---DGK 2978
Query: 692 WHKI 703
WH +
Sbjct: 2979 WHTV 2982
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 512 ISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGN 691
+ +E+RPR G+L SV G +Y+ +E ++ + VE+G+G + ++ CDG
Sbjct: 3545 LEVEMRPRMKNGILFSV-GVLEYITVEFVNGSIKTTVESGSGGEELWHHPDIENQYCDGQ 3603
Query: 692 W 694
W
Sbjct: 3604 W 3604
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 46 FLAFFMRDAKLHYMFNCGGETGV-ISSTHTYNDIDWHTVTLKRNGGHGKLAVDSE 207
F+A + D + + G G I+ + YND WHTV++ R H K+ +D E
Sbjct: 2944 FMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSIVREEKHVKIMIDGE 2998
Score = 36.3 bits (80), Expect = 0.026
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +2
Query: 512 ISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGN 691
IS+ + GLL V KD+M LEL D V +V+ G+G + + SN + DG
Sbjct: 2922 ISLSFLTFSPHGLLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESSNYN---DGK 2978
Query: 692 WHKI 703
WH +
Sbjct: 2979 WHTV 2982
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 46 FLAFFMRDAKLHYMFNCGG-ETGVISSTHTYNDIDWHTVTLKRNGGHGKLAVDSE 207
F+A ++ D K+ + N GG ++S + YND HTV R G L VDS+
Sbjct: 2516 FVAIYLNDGKVMFKINLGGGSVAELTSQNVYNDGKEHTVKAIRTGSEMYLQVDSD 2570
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 76 LHYMFNCGGETGVIS--STHTYNDIDWHTVTLKRNGGHGKLAVDSEMVGET 222
LH+ + V++ S+H YND H V ++RNG + VD + +G++
Sbjct: 2723 LHFGKDASSRKEVVTFRSSHPYNDGQVHAVFMERNGKIISVKVDDKEIGDS 2773
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 136 NDIDWHTVTLKRNGGHGKLAVDSEMVGETSVT-CNTP 243
ND WH +T+++ KL +DS +G +T C TP
Sbjct: 2994 NDGQWHDITVEKKNRSLKLIIDS--LGPVEMTDCPTP 3028
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 46 FLAFFMRDAKLHYMFNCGG-ETGVISSTHTYNDIDWHTVTLKRNGGHGKLAVDSE 207
F+A ++ D K+ + N GG ++S + YND HTV R G L VDS+
Sbjct: 2516 FVAIYLNDGKVMFKINLGGGSVAELTSQNVYNDGKEHTVKAIRTGSEMYLQVDSD 2570
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 76 LHYMFNCGGETGVIS--STHTYNDIDWHTVTLKRNGGHGKLAVDSEMVGET 222
LH+ + V++ S+H YND H V ++RNG + VD + +G++
Sbjct: 2723 LHFGKDASSRKEVVTFRSSHPYNDGQVHAVFMERNGKIISVKVDDKEIGDS 2773
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 136 NDIDWHTVTLKRNGGHGKLAVDSEMVGETSVT-CNTP 243
ND WH +T+++ KL +DS +G +T C TP
Sbjct: 2994 NDGQWHDITVEKKNRSLKLIIDS--LGPVEMTDCPTP 3028
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 46 FLAFFMRDAKLHYMFNCGG-ETGVISSTHTYNDIDWHTVTLKRNGGHGKLAVDSE 207
F+A ++ D K+ + N GG ++S + YND HTV R G L VDS+
Sbjct: 2516 FVAIYLNDGKVMFKINLGGGSVAELTSQNVYNDGKEHTVKAIRTGSEMYLQVDSD 2570
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 76 LHYMFNCGGETGVIS--STHTYNDIDWHTVTLKRNGGHGKLAVDSEMVGET 222
LH+ + V++ S+H YND H V ++RNG + VD + +G++
Sbjct: 2723 LHFGKDASSRKEVVTFRSSHPYNDGQVHAVFMERNGKIISVKVDDKEIGDS 2773
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 136 NDIDWHTVTLKRNGGHGKLAVDSEMVGETSVT-CNTP 243
ND WH +T+++ KL +DS +G +T C TP
Sbjct: 2994 NDGQWHDITVEKKNRSLKLIIDS--LGPVEMTDCPTP 3028
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 494 SWGRGSISMEVRPRNTTGLLL----SVHGKKDYMVLELLDSEVVANVENGNGPFRATYKL 661
S GS+S R ++ GL+L H DY+ EL+DS + + G+G R
Sbjct: 485 SLSSGSLSFHFRTTSSDGLILYHGVMQHNATDYVAFELIDSHLFMIINLGSGVVRLQ--- 541
Query: 662 SNKHYLCDGNWHKI 703
+ + DG WH +
Sbjct: 542 TTSMKVSDGEWHHV 555
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 36.3 bits (80), Expect = 0.026
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 1 VIFYAESAHDKNPVQFLAFFMRDAKLHYMFNCGGETGVISSTHTYNDIDWHTVTLKRNGG 180
++FY D + F+AF M DAK H+++ G I + WHTV ++R
Sbjct: 1165 ILFYWSVPSDPH-TDFIAFAMIDAKPHFVYELGSGLSYIRGEPIPLN-SWHTVRIER--- 1219
Query: 181 HGKLAVDSEM-VGETSVTCNTPLSL-AHLTITE 273
LA D M V ET V +T S AHL I++
Sbjct: 1220 ---LAKDVSMFVNETLVKKHTSQSKNAHLDISK 1249
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 46 FLAFFMRDAKLHYMFNCGGETGV--ISSTHTYNDIDWHTVTLKRNGGHGKLAVDSEMV 213
FL F+ + KL+ N G + + IS+ T D WH+V+ +R +L VDS+ +
Sbjct: 1354 FLLVFIEEGKLYVGVNLGADVHLKPISTNVTVADNHWHSVSFRRKERKCELWVDSKKI 1411
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 36.3 bits (80), Expect = 0.026
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 1 VIFYAESAHDKNPVQFLAFFMRDAKLHYMFNCGGETGVISSTHTYNDIDWHTVTLKRNGG 180
++FY D + F+AF M DAK H+++ G I + WHTV ++R
Sbjct: 1117 ILFYWSVPSDPH-TDFIAFAMIDAKPHFVYELGSGLSYIRGEPIPLN-SWHTVRIER--- 1171
Query: 181 HGKLAVDSEM-VGETSVTCNTPLSL-AHLTITE 273
LA D M V ET V +T S AHL I++
Sbjct: 1172 ---LAKDVSMFVNETLVKKHTSQSKNAHLDISK 1201
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 46 FLAFFMRDAKLHYMFNCGGETGV--ISSTHTYNDIDWHTVTLKRNGGHGKLAVDSEMV 213
FL F+ + KL+ N G + + IS+ T D WH+V+ +R +L VDS+ +
Sbjct: 1344 FLLVFIEEGKLYVGVNLGADVHLKPISTNVTVADNHWHSVSFRRKERKCELWVDSKKI 1401
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 35.1 bits (77), Expect = 0.060
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 470 FEVARELQSWGRGSISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRA 649
FE++ + R + +E++ G+++ GK+D+ +L L++ + G G
Sbjct: 3747 FEISLSNEIETRMELEIELKTTTHNGIIMWSRGKRDFHMLRLVNGTPEYHWNAGTGTGIV 3806
Query: 650 TYKLSNKHYLCDGNWHKI 703
T K S + DG WH+I
Sbjct: 3807 TSKTS----VVDGQWHRI 3820
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 82 YMFNCGGETGVISSTHTYNDIDWHTVTLKRNGGHGKLAVDSEMVGE 219
Y +N G TG+++S + D WH + + R ++ VD E + E
Sbjct: 3795 YHWNAGTGTGIVTSKTSVVDGQWHRIAISRRQRRTRMTVDDEDLQE 3840
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 35.1 bits (77), Expect = 0.060
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 470 FEVARELQSWGRGSISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRA 649
FE++ + R + +E++ G+++ GK+D+ +L L++ + G G
Sbjct: 3747 FEISLSNEIETRMELEIELKTTTHNGIIMWSRGKRDFHMLRLVNGTPEYHWNAGTGTGIV 3806
Query: 650 TYKLSNKHYLCDGNWHKI 703
T K S + DG WH+I
Sbjct: 3807 TSKTS----VVDGQWHRI 3820
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 82 YMFNCGGETGVISSTHTYNDIDWHTVTLKRNGGHGKLAVDSEMVGE 219
Y +N G TG+++S + D WH + + R ++ VD E + E
Sbjct: 3795 YHWNAGTGTGIVTSKTSVVDGQWHRIAISRRQRRTRMTVDDEDLQE 3840
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 35.1 bits (77), Expect = 0.060
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 470 FEVARELQSWGRGSISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENGNGPFRA 649
FE++ + R + +E++ G+++ GK+D+ +L L++ + G G
Sbjct: 3747 FEISLSNEIETRMELEIELKTTTHNGIIMWSRGKRDFHMLRLVNGTPEYHWNAGTGTGIV 3806
Query: 650 TYKLSNKHYLCDGNWHKI 703
T K S + DG WH+I
Sbjct: 3807 TSKTS----VVDGQWHRI 3820
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 82 YMFNCGGETGVISSTHTYNDIDWHTVTLKRNGGHGKLAVDSEMVGE 219
Y +N G TG+++S + D WH + + R ++ VD E + E
Sbjct: 3795 YHWNAGTGTGIVTSKTSVVDGQWHRIAISRRQRRTRMTVDDEDLQE 3840
>U51995-6|AAA96074.1| 430|Caenorhabditis elegans Hypothetical
protein F07G6.3 protein.
Length = 430
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -3
Query: 524 PPLI*NLVPNFEVL*QLQIVAV-CIVRCFEVDAVFDVIDASQGVHSVANTSHLLTVHEKS 348
PPL N++ NF+ IV + C +E + +ID+ + +T+ EKS
Sbjct: 226 PPLNSNILENFQNCESTSIVTIECSKTDYETEHETQIIDSPDAIQKETTAIESITIQEKS 285
Query: 347 LEAAHKRLVEVVEDLRNSFV 288
+ + ++ + + N+ V
Sbjct: 286 CDNENDKIEHITHNSLNNQV 305
>Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical
protein T01H3.2 protein.
Length = 980
Score = 31.9 bits (69), Expect = 0.56
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 513 YQWRYVPVTPRG--CCSASTGRRTTWCLSCSTAKWSRTSRTETDRSALRTNSATNIT 677
+ W+ +P TP+ SAS G RT WC++ W R + D L+ + NIT
Sbjct: 283 FSWKSIP-TPKNKAVISASIGTRTMWCITADGCVW--FVRLDIDEK-LKEHKMENIT 335
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 76 LHYMFNCGGETGVISSTHTYNDIDWHTVTLKRNGGHGKLAVDS 204
LH+ + GG + S +D H+V +R G G++ +D+
Sbjct: 3247 LHFSYELGGGAAHLISEERVDDGKEHSVRFERKGREGQMRIDN 3289
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 76 LHYMFNCGGETGVISSTHTYNDIDWHTVTLKRNGGHGKLAVDS 204
LH+ + GG + S +D H+V +R G G++ +D+
Sbjct: 3247 LHFSYELGGGAAHLISEERVDDGKEHSVRFERKGREGQMRIDN 3289
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 76 LHYMFNCGGETGVISSTHTYNDIDWHTVTLKRNGGHGKLAVDS 204
LH+ + GG + S +D H+V +R G G++ +D+
Sbjct: 797 LHFSYELGGGAAHLISEERVDDGKEHSVRFERKGREGQMRIDN 839
>AF045640-2|AAM81123.1| 185|Caenorhabditis elegans Hypothetical
protein C11D2.7 protein.
Length = 185
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 566 GKKDYMVLELLD--SEVVANVENGNGPFRATYKLSNKHYLCDGNWH 697
GK+ + + L+ SE + +V GNG + N HYL DG WH
Sbjct: 140 GKQHALAIGLMSMSSEEIQSVNKGNG-------IENLHYLNDGLWH 178
>AF003145-9|AAT68904.1| 585|Caenorhabditis elegans Hypothetical
protein B0414.8b protein.
Length = 585
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 333 MGCLKGLLMNGQQ-VTRIGNAVNALRCVDNIEDGVYFEASNNTHSNYLKLLENFKVGDEV 509
+G L G+L + + ++G++ + + +I D + S NY ++L FK+ +E
Sbjct: 94 IGNLDGVLGEKRDDILQLGSSYKVVNSLKHIFDLPHVLRSEFDERNYGEVLRMFKLAEES 153
Query: 510 LYQWRYVP 533
L Q++ VP
Sbjct: 154 LSQYKDVP 161
>AF003145-8|AAB57721.2| 700|Caenorhabditis elegans Hypothetical
protein B0414.8a protein.
Length = 700
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 333 MGCLKGLLMNGQQ-VTRIGNAVNALRCVDNIEDGVYFEASNNTHSNYLKLLENFKVGDEV 509
+G L G+L + + ++G++ + + +I D + S NY ++L FK+ +E
Sbjct: 94 IGNLDGVLGEKRDDILQLGSSYKVVNSLKHIFDLPHVLRSEFDERNYGEVLRMFKLAEES 153
Query: 510 LYQWRYVP 533
L Q++ VP
Sbjct: 154 LSQYKDVP 161
>Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical
protein F28H7.8 protein.
Length = 410
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +2
Query: 452 QYTQQLFEVARELQSWGRGSISMEVRPRNTTGLLLSVHGKKDYMVLELLDSEVVANVENG 631
Q T+ L E+ R + R + ME TG+ +H D L D ++ V
Sbjct: 124 QPTEYLHEMFRSFEEIQRRLMKMEAE----TGVQCYMHYIFDLEALNF-DPTLLGVV--- 175
Query: 632 NGPFRATYKLSNKHY 676
NGPFR +++L +HY
Sbjct: 176 NGPFRVSWQLVGQHY 190
>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
protein F20B10.1 protein.
Length = 1180
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +1
Query: 19 SAHDKNPVQFLAFFMRDAKLHYMFNCGGETGVISSTHTYNDIDWHTVTLKRNGGHGKLAV 198
S H + + + ++ D K+ GGE+ I S H Y+D +H + + + L V
Sbjct: 736 SWHSTDDLHWFHLYVNDGKIVGEVVNGGESQQIVSEHRYDDGKFHAIYWEADSTGMFLKV 795
Query: 199 DSE 207
D +
Sbjct: 796 DGQ 798
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,824,815
Number of Sequences: 27780
Number of extensions: 330581
Number of successful extensions: 1143
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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