Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00058
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 87 2e-17
AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 4.7
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 4.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.7
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 4.7
Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical pr... 28 6.2
U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical pr... 28 6.2
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 86.6 bits (205), Expect = 2e-17
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = +2
Query: 41 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 214
M IYKDI T DE+ SD++ MKLVD+++YE G+ V R +G+I + G NPSAEE D+G+
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 215 DSAVESGVDIVLN 253
D VE G+DIVLN
Sbjct: 61 DEHVERGIDIVLN 73
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +1
Query: 259 LVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQ--VEVFKTNMNKVMKDILG--RFKE 426
LVE + D + Y+K +MK ++ +E+ D+ V+ FK + + +L RFK
Sbjct: 76 LVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKN 135
Query: 427 LQFFTGESM---DCDGMVAMMEYRDFDGTQ 507
L FF GE +G VA++EYRD DGT+
Sbjct: 136 LAFFIGERAAEGAENGQVAIIEYRDVDGTE 165
>AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical
protein F52F10.2 protein.
Length = 508
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 393 FVHVCFKYFNLVRRLLFQFCY*FFHI 316
F+++C +Y RR L FCY F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 286 KKSYTLYLKDYMKKLVAKLEEK 351
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 286 KKSYTLYLKDYMKKLVAKLEEK 351
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 268 TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 432
T+ FG D++ Y++ +KD KKL + E+ + TN K + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 268 TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 432
T+ FG D++ Y++ +KD KKL + E+ + TN K + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 286 KKSYTLYLKDYMKKLVAKLEEK 351
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical
protein ZK945.3 protein.
Length = 766
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 283 DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKE 426
+KK+ L L +K + K+EEKA K+ ++K +KD L R K+
Sbjct: 22 EKKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLKK 64
>U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical
protein F09F9.5 protein.
Length = 219
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 345 FQFCY*FFHIVFEVQCVGFLVTEGVCF 265
+Q C+ F H+ +GF GVCF
Sbjct: 53 YQTCFGFMHVKIATCSIGFFALLGVCF 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,869,295
Number of Sequences: 27780
Number of extensions: 314144
Number of successful extensions: 892
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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