BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00058 (753 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 87 2e-17 AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 29 2.7 Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 4.7 Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 4.7 AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.7 AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.7 AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 4.7 Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical pr... 28 6.2 U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical pr... 28 6.2 >Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical protein F25H2.11 protein. Length = 181 Score = 86.6 bits (205), Expect = 2e-17 Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 2/73 (2%) Frame = +2 Query: 41 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 214 M IYKDI T DE+ SD++ MKLVD+++YE G+ V R +G+I + G NPSAEE D+G+ Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60 Query: 215 DSAVESGVDIVLN 253 D VE G+DIVLN Sbjct: 61 DEHVERGIDIVLN 73 Score = 52.8 bits (121), Expect = 3e-07 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 7/90 (7%) Frame = +1 Query: 259 LVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQ--VEVFKTNMNKVMKDILG--RFKE 426 LVE + D + Y+K +MK ++ +E+ D+ V+ FK + + +L RFK Sbjct: 76 LVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKN 135 Query: 427 LQFFTGESM---DCDGMVAMMEYRDFDGTQ 507 L FF GE +G VA++EYRD DGT+ Sbjct: 136 LAFFIGERAAEGAENGQVAIIEYRDVDGTE 165 >AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical protein F52F10.2 protein. Length = 508 Score = 29.5 bits (63), Expect = 2.7 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -1 Query: 393 FVHVCFKYFNLVRRLLFQFCY*FFHI 316 F+++C +Y RR L FCY F I Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162 >Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical protein C02F4.1 protein. Length = 1781 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +1 Query: 286 KKSYTLYLKDYMKKLVAKLEEK 351 +K+Y YL+++MK LVA + EK Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775 >Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein C02F4.1 protein. Length = 1781 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +1 Query: 286 KKSYTLYLKDYMKKLVAKLEEK 351 +K+Y YL+++MK LVA + EK Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775 >AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein protein. Length = 18519 Score = 28.7 bits (61), Expect = 4.7 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +1 Query: 268 TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 432 T+ FG D++ Y++ +KD KKL + E+ + TN K + G+ K L+ Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159 >AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein protein. Length = 18534 Score = 28.7 bits (61), Expect = 4.7 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +1 Query: 268 TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 432 T+ FG D++ Y++ +KD KKL + E+ + TN K + G+ K L+ Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159 >AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. Length = 1781 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +1 Query: 286 KKSYTLYLKDYMKKLVAKLEEK 351 +K+Y YL+++MK LVA + EK Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775 >Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical protein ZK945.3 protein. Length = 766 Score = 28.3 bits (60), Expect = 6.2 Identities = 17/48 (35%), Positives = 27/48 (56%) Frame = +1 Query: 283 DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKE 426 +KK+ L L +K + K+EEKA K+ ++K +KD L R K+ Sbjct: 22 EKKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLKK 64 >U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical protein F09F9.5 protein. Length = 219 Score = 28.3 bits (60), Expect = 6.2 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -1 Query: 345 FQFCY*FFHIVFEVQCVGFLVTEGVCF 265 +Q C+ F H+ +GF GVCF Sbjct: 53 YQTCFGFMHVKIATCSIGFFALLGVCF 79 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,869,295 Number of Sequences: 27780 Number of extensions: 314144 Number of successful extensions: 892 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 861 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 890 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1788025660 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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