Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00056
(492 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 1.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 3.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 3.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 3.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 3.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 3.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 3.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 3.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 3.1
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 3.1
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 21 5.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.4
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 9.4
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 1.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQTPQT 366
+DEAE S+ G + QS I +VAR+ +T T
Sbjct: 272 SDEAEPSSTSKKSGIVRSHQQSCINRVARETKTAGT 307
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 304 RHQYCQSWILQVARQRQTPQTTCHSKS 384
RH ++W+ R + TPQ+ S++
Sbjct: 241 RHLERKAWVASFGRPKMTPQSLLPSQT 267
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 3.1
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = -1
Query: 270 SLVCSGLMSKAYLSSKLDRNSCSV*SGNFSYQVCQSIQDGTCPC*FCD 127
S+V S +YL KL+RN + + Q +C C CD
Sbjct: 287 SVVVSDYSDYSYLDEKLERNDLDL--EKYEGISSTPSQASSCSCLDCD 332
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = -3
Query: 289 WSRCILQPRLFRTNVQSLSKFKTGQKFL 206
W +CIL + V ++ +K K L
Sbjct: 111 WDKCILSSESYNPQVDFVADYKIEGKVL 138
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 285 ADAYFSLVCSGLMSKAYLSSKLDRNS 208
+D+ +S CS S+ S + RNS
Sbjct: 13 SDSGYSNTCSNSQSQRSSGSSISRNS 38
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 285 ADAYFSLVCSGLMSKAYLSSKLDRNS 208
+D+ +S CS S+ S + RNS
Sbjct: 13 SDSGYSNTCSNSQSQRSSGSSISRNS 38
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,749
Number of Sequences: 438
Number of extensions: 2713
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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