Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00052
(404 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0521 + 3867922-3867967,3868282-3868544,3868680-3868744,386... 33 0.086
09_04_0460 - 17779111-17780184 32 0.15
03_02_0392 - 8070342-8071628 31 0.46
06_03_0436 + 20755816-20756025,20756124-20756240,20756942-207571... 29 1.1
05_04_0285 - 19825106-19826988,19828479-19828529,19830013-19830361 29 1.4
03_02_0874 + 12017069-12018051,12018137-12018316,12018421-120186... 28 2.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 27 4.3
07_03_0677 + 20620873-20621401,20621555-20621580,20621659-206221... 27 5.6
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 27 5.6
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 27 5.6
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 27 5.6
09_04_0226 - 15859439-15860377 27 7.5
07_01_0947 + 7982783-7983619,7983713-7983859,7983953-7984318 27 7.5
05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621 27 7.5
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 27 7.5
03_05_0031 + 20040889-20041592,20041932-20041977 27 7.5
02_04_0382 - 22501041-22501279,22501717-22501810 27 7.5
01_01_0888 + 6990354-6991862,6991970-6992431 27 7.5
11_05_0077 - 18866707-18867334,18867410-18867555 26 9.9
10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540... 26 9.9
10_08_0541 - 18637798-18638007,18639048-18639174,18639723-18639760 26 9.9
04_01_0580 - 7539208-7539328,7539409-7539579,7539658-7540024,754... 26 9.9
>07_01_0521 +
3867922-3867967,3868282-3868544,3868680-3868744,
3868828-3868990,3869798-3869946,3870041-3870289,
3870860-3871028,3871110-3871202,3871703-3871952,
3872127-3872217,3872673-3872769
Length = 544
Score = 33.1 bits (72), Expect = 0.086
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 355 VEGFHCHGWIMKP*YSGLSATVPLFPHTRRS 263
+ GF W++KP Y +S ++PLF + RRS
Sbjct: 107 ISGFSSLPWLIKPLYGFISDSIPLFGYRRRS 137
>09_04_0460 - 17779111-17780184
Length = 357
Score = 32.3 bits (70), Expect = 0.15
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +2
Query: 101 DRYGDRKTWGSNDSSEKRHTWYLYPVKVGDQQLFLIENREYRQGLKLDANVAGTGPPCVG 280
D +GD + H WY+ V + + + I EYR G+ + A C+G
Sbjct: 107 DGFGDGDEEAGGGGGDVHHVWYIRTVGLDEATITSIATAEYRAGVGWGGDCA----VCLG 162
Query: 281 E*RDSRRQPRVLRLHNP 331
E RD + R +P
Sbjct: 163 EFRDGELVRLLPRCSHP 179
>03_02_0392 - 8070342-8071628
Length = 428
Score = 30.7 bits (66), Expect = 0.46
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 278 PHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
P KA P RP SRPA+ A S G R P+P
Sbjct: 11 PSKARPPRPASRPAATAAAAAASDDGEYSARAPAP 45
>06_03_0436 +
20755816-20756025,20756124-20756240,20756942-20757137,
20757393-20757544,20757653-20757736,20757848-20757925,
20757958-20758116,20758219-20758251,20759119-20759826,
20759917-20759998,20760093-20760449,20760586-20760692,
20760796-20761001,20761480-20761623,20761715-20761800,
20762120-20762283,20762559-20763119
Length = 1147
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 46 LQDTEHRTRDVLETGRERGQIWRQEDLGIE*F 141
L+D++ R RD+ E R QIW Q+++ + F
Sbjct: 539 LEDSKTRVRDLEELLESRSQIWEQKEIRLNQF 570
>05_04_0285 - 19825106-19826988,19828479-19828529,19830013-19830361
Length = 760
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSR-PASGPAGTPYSQ*GTAVGRPPSPGINTR 159
P +P H +P+ PR+R P S P TP S T + + G +R
Sbjct: 59 PPLPCHPRIPHLPRAREPPSLPPSTPISTPNTNLLKLAQAGEGSR 103
>03_02_0874 +
12017069-12018051,12018137-12018316,12018421-12018600,
12018718-12018797,12018999-12019259,12019360-12019474,
12019631-12019855,12020840-12020849
Length = 677
Score = 28.3 bits (60), Expect = 2.4
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = -1
Query: 377 VYYNMVRCRRVSLPRL---DYEAVVLGVVGDCPVIPPHKAVPYRPRSRPAS-GPAGTPYS 210
+YY C+ S R D A + G D + + RS+ GPA PYS
Sbjct: 240 LYYARGFCKNGSSCRFVHGDDAAALTGAAMDAATAEQQQCQDFLLRSKSQRLGPAAFPYS 299
Query: 209 Q*GTAVGRPPSPGINTRCVS 150
G+ P SP T+C+S
Sbjct: 300 PTGSL---PGSPSAATKCLS 316
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -1
Query: 299 GDCPVIPPHKAVPYRPR-SRPASGPAGTPYSQ*GTAVGRPPSPGI 168
G P PP A P PR P GP P + G G PP P +
Sbjct: 346 GSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAA-GRGGGGPPPPAL 389
>07_03_0677 +
20620873-20621401,20621555-20621580,20621659-20622105,
20622193-20623079,20623158-20623328,20623411-20623603,
20623785-20623823,20623929-20623967
Length = 776
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 323 EAVVLGVVGDCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPS 177
E + LG D + P + R +RP + P G P + +A PP+
Sbjct: 400 EVLSLGNARDTFIQWPKDLIEIRVTARPTTAPGGRPPKRPASAPSAPPA 448
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = -1
Query: 299 GDCPVIPPHKAVPYRPRSRPA--SGPAGTPYSQ*GTAVG-RPPSP 174
G P PP K V Y P+ +PA PA + G RPP P
Sbjct: 36 GSGPTPPPIKPVSYAPKPQPAPEEAPAAAEEAAPSDDPGSRPPPP 80
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -1
Query: 290 PVIPPHK-AVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPG 171
P +PP AVP P PA AG SQ PP PG
Sbjct: 389 PAVPPGPPAVPAPPTYPPADPAAGGYTSQPYMGAPPPPPPG 429
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPASGPAGT--PYSQ*GTAVGRPPSPG 171
PP P+ P+ GP GT P SQ A PPS G
Sbjct: 128 PPPSQGPFGTAPPPSQGPFGTAPPPSQGPFAASVPPSQG 166
>09_04_0226 - 15859439-15860377
Length = 312
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 287 RDSRRQPRVLRLHNPAVAVKPFY 355
+D+RR R L+ N A+KPFY
Sbjct: 287 KDNRRWARTLQYFNFTAALKPFY 309
>07_01_0947 + 7982783-7983619,7983713-7983859,7983953-7984318
Length = 449
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -3
Query: 366 HGQM*KGFTATAGL*SRSTRGCRRLSRYSPT 274
HG + G A L R RGCRRLS SPT
Sbjct: 185 HGVL-AGCAALDCLLLRGVRGCRRLSISSPT 214
>05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621
Length = 283
Score = 26.6 bits (56), Expect = 7.5
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = -1
Query: 323 EAVVLGVVGDCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPP 180
E VLGV GD P PP + P P G G S+ G V PP
Sbjct: 39 EGWVLGVDGDLPPPPPDDGGEFPP--PPDDGGEGV--SEGGAGVAGPP 82
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 281 PPHKAVPY-RPRSRPASGPAGTPYSQ*GTA-VGRPPSP 174
P +AVP +P S PASGPA P S A VG +P
Sbjct: 753 PAPQAVPLPKPVSIPASGPAPAPVSATTAAPVGAAAAP 790
>03_05_0031 + 20040889-20041592,20041932-20041977
Length = 249
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSSHWNHSIPRSS 117
DC V + P R R A+ + + AV + G + V++ ++HSIP+ +
Sbjct: 45 DCTVSSAYGVFPDRSTCRAAAAVYPSTEEELVRAVANATASGTKMK-VATRYSHSIPQLA 103
Query: 116 C 114
C
Sbjct: 104 C 104
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPAS-GPAGTPYSQ*GTAVGRPPSP 174
PPH Y P P P +PY G G+PP P
Sbjct: 65 PPHSPDYYDPPPSPDYYDPPPSPYYGGGGGYGKPPPP 101
>01_01_0888 + 6990354-6991862,6991970-6992431
Length = 656
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 4 QLATHLSLGKQQRHLQDTEHRTRD 75
Q+ THL G+QQ+ Q E R +D
Sbjct: 135 QITTHLRGGRQQQQQQQPEQRRQD 158
>11_05_0077 - 18866707-18867334,18867410-18867555
Length = 257
Score = 26.2 bits (55), Expect = 9.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 269 PCVGE*RDSRRQPRVLRLHNPAVAVKP 349
P VG R +R PR+L H P V ++P
Sbjct: 68 PGVGARRGARAGPRLLPPHRPPVPLRP 94
>10_08_0583 -
18952168-18952263,18953663-18953740,18954006-18954081,
18954687-18954735,18955271-18955469,18955761-18955799,
18955800-18956123
Length = 286
Score = 26.2 bits (55), Expect = 9.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 269 AVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVS 150
A R + PA+ A P + G A + PSP NT ++
Sbjct: 147 AASCRNNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVIN 186
>10_08_0541 - 18637798-18638007,18639048-18639174,18639723-18639760
Length = 124
Score = 26.2 bits (55), Expect = 9.9
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -3
Query: 189 SPTFTGYKYQVCLFSLESFDPQVFLSPYLSTFTSSFKYISCSVFSILKMTLLFSQRE 19
SP G +Y + + DP+VF++ S IS S+ +LL S E
Sbjct: 7 SPPAKGGQYNPSYQNFKIVDPKVFMAAQTLELQSRTTRISSKCMSLFSQSLLVSAME 63
>04_01_0580 -
7539208-7539328,7539409-7539579,7539658-7540024,
7540093-7540516
Length = 360
Score = 26.2 bits (55), Expect = 9.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 323 EAVVLGVVGDCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPS 177
E + LG + P + R R+RP + P+G P + +A PP+
Sbjct: 55 EVLSLGNASGTFIQWPKDLIEIRDRARPTTAPSGRPPKRPDSAPLAPPA 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,979,525
Number of Sequences: 37544
Number of extensions: 279362
Number of successful extensions: 982
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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