Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00052
(404 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF110265-1|AAF21930.1| 864|Homo sapiens epidermal growth factor... 32 0.63
AB015346-1|BAA88118.1| 864|Homo sapiens Eps15R protein. 32 0.63
U79754-1|AAF21464.1| 600|Homo sapiens proline oxidase 2 protein. 31 1.5
AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein. 31 1.9
AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein. 31 1.9
AK125979-1|BAC86373.1| 738|Homo sapiens (Hapip). protein. 30 2.6
U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulator... 30 3.4
M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulat... 30 3.4
M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promot... 30 3.4
BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfam... 30 3.4
BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfam... 30 3.4
Y08262-1|CAA69589.1| 914|Homo sapiens SCA2 protein. 29 4.5
U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein. 29 4.5
U69537-1|AAB09039.1| 421|Homo sapiens forkhead transcription fa... 29 4.5
BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein. 29 4.5
BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein. 29 4.5
X99350-1|CAA67730.1| 419|Homo sapiens protein ( H.sapiens HFH4 ... 29 5.9
X99349-1|CAA67729.1| 419|Homo sapiens fork head homologue 4 pro... 29 5.9
S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein. 29 5.9
BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein. 29 5.9
BC046460-1|AAH46460.1| 421|Homo sapiens forkhead box J1 protein. 29 5.9
AJ272064-1|CAB76562.1| 421|Homo sapiens forkhead transcription ... 29 5.9
AF155108-1|AAD42874.1| 241|Homo sapiens NY-REN-41 antigen protein. 29 5.9
Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated ph... 29 7.8
X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated ph... 29 7.8
X07882-1|CAA30729.1| 226|Homo sapiens Po protein protein. 29 7.8
X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein. 29 7.8
K02576-1|AAA36503.1| 93|Homo sapiens protein ( Human salivary ... 29 7.8
BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein. 29 7.8
BC117238-1|AAI17239.1| 676|Homo sapiens LIM domains containing ... 29 7.8
BC117236-1|AAI17237.1| 676|Homo sapiens LIM domains containing ... 29 7.8
BC058015-1|AAH58015.1| 197|Homo sapiens KALRN protein protein. 29 7.8
BC046200-1|AAH46200.1| 251|Homo sapiens chromosome 17 open read... 29 7.8
BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated ... 29 7.8
BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated ... 29 7.8
BC025959-1|AAH25959.1| 492|Homo sapiens dynein, cytoplasmic 1, ... 29 7.8
AJ312686-1|CAC35917.1| 503|Homo sapiens LIM domains containing ... 29 7.8
AJ132408-1|CAB63652.1| 676|Homo sapiens LIM domains containing ... 29 7.8
AF035812-1|AAB88513.1| 492|Homo sapiens dynein light intermedia... 29 7.8
>AF110265-1|AAF21930.1| 864|Homo sapiens epidermal growth factor
receptor substrate EPS15R protein.
Length = 864
Score = 32.3 bits (70), Expect = 0.63
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTA 195
D P +PP K P PR +P SG + TP SQ G+A
Sbjct: 775 DTPALPPKKPAP--PRPKPPSGKS-TPVSQLGSA 805
>AB015346-1|BAA88118.1| 864|Homo sapiens Eps15R protein.
Length = 864
Score = 32.3 bits (70), Expect = 0.63
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTA 195
D P +PP K P PR +P SG + TP SQ G+A
Sbjct: 775 DTPALPPKKPAP--PRPKPPSGKS-TPVSQLGSA 805
>U79754-1|AAF21464.1| 600|Homo sapiens proline oxidase 2 protein.
Length = 600
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSR--PASGPAGTPYSQ*GTAVGRPPSPGIN 165
P IP + P SR PA+GPA P TAV RPP P ++
Sbjct: 12 PCIPRFVQLSTAPASREQPAAGPAAVPGGGSATAV-RPPVPAVD 54
>AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein.
Length = 1575
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTR 159
PV PP + P + P+ + P + +G PPSPG+ R
Sbjct: 1113 PVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARR 1156
>AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein.
Length = 1311
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTR 159
PV PP + P + P+ + P + +G PPSPG+ R
Sbjct: 1113 PVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARR 1156
>AK125979-1|BAC86373.1| 738|Homo sapiens (Hapip). protein.
Length = 738
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +2
Query: 116 RKTWGSNDSSEKRHTWYLYPVKVGD----QQLFLIENREYRQGLKLDANV--AGTGPPCV 277
+K WG ++ E+ HT P+K+ D Q +E YR LK A G PP
Sbjct: 196 KKGWGEDEPDEESHTPLPPPMKIFDNDPTQDEMSLEGSSYRGSLKDPAGCLNEGMAPPTP 255
Query: 278 GE*RDSRRQPRVLR 319
+ + ++ + LR
Sbjct: 256 PKNPEEEQKAKALR 269
>U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulatory
protein-1 protein.
Length = 414
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSSH 144
PV P P+ P++ GPA TP G P PG + + H
Sbjct: 28 PVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQQH 76
>M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulatory
protein-1 protein.
Length = 414
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSSH 144
PV P P+ P++ GPA TP G P PG + + H
Sbjct: 28 PVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQQH 76
>M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promoter
transcription factor II protein.
Length = 351
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSSH 144
PV P P+ P++ GPA TP G P PG + + H
Sbjct: 28 PVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQQH 76
>BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSSH 144
PV P P+ P++ GPA TP G P PG + + H
Sbjct: 28 PVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQQH 76
>BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSSH 144
PV P P+ P++ GPA TP G P PG + + H
Sbjct: 28 PVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQQH 76
>Y08262-1|CAA69589.1| 914|Homo sapiens SCA2 protein.
Length = 914
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 284 IPPHKAVPYRPRSRPASGPAGTP 216
+PP A P RP SRP S P+ P
Sbjct: 493 LPPRAATPTRPPSRPPSRPSRPP 515
>U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.
Length = 1312
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 284 IPPHKAVPYRPRSRPASGPAGTP 216
+PP A P RP SRP S P+ P
Sbjct: 573 LPPRAATPTRPPSRPPSRPSRPP 595
>U69537-1|AAB09039.1| 421|Homo sapiens forkhead transcription
factor HFH-4 protein.
Length = 421
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSS 147
P +PP P+ P S G+P + +G+P +PG T +S
Sbjct: 50 PALPPGATDPHGYHQVPGSAAPGSPLAADPACLGQPHTPGKPTSSCTS 97
>BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein.
Length = 1006
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 284 IPPHKAVPYRPRSRPASGPAGTP 216
+PP A P RP SRP S P+ P
Sbjct: 285 LPPRAATPTRPPSRPPSRPSRPP 307
>BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein.
Length = 1127
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 284 IPPHKAVPYRPRSRPASGPAGTP 216
+PP A P RP SRP S P+ P
Sbjct: 363 LPPRAATPTRPPSRPPSRPSRPP 385
>X99350-1|CAA67730.1| 419|Homo sapiens protein ( H.sapiens HFH4
gene, exon 1 and joined CDS. ).
Length = 419
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSS 147
P +PP P+ P S G+P + +G+P +PG T +S
Sbjct: 49 PALPPGGTDPHGYHQVPGSAAPGSPLAADPACLGQPHTPGKPTSSCTS 96
>X99349-1|CAA67729.1| 419|Homo sapiens fork head homologue 4
protein.
Length = 419
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSS 147
P +PP P+ P S G+P + +G+P +PG T +S
Sbjct: 49 PALPPGGTDPHGYHQVPGSAAPGSPLAADPACLGQPHTPGKPTSSCTS 96
>S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein.
Length = 238
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPG 171
PPH P RP + + GTP G GRPP G
Sbjct: 63 PPHPGKPERPPPQGGNQSQGTPPPP-GKPEGRPPQGG 98
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
PP P +P++ PA P G P G GRPP P
Sbjct: 198 PPPGGNPQQPQAPPAGKPQGPPPPPQG---GRPPRP 230
>BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein.
Length = 268
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPG 171
PPH P RP + + GTP G GRPP G
Sbjct: 93 PPHPGKPERPPPQGGNQSQGTPPPP-GKPEGRPPQGG 128
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
PP P +P++ PA P G P G GRPP P
Sbjct: 228 PPPGGNPQQPQAPPAGKPQGPPPPPQG---GRPPRP 260
>BC046460-1|AAH46460.1| 421|Homo sapiens forkhead box J1 protein.
Length = 421
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSS 147
P +PP P+ P S G+P + +G+P +PG T +S
Sbjct: 50 PALPPGGTDPHGYHQVPGSAAPGSPLAADPACLGQPHTPGKPTSSCTS 97
>AJ272064-1|CAB76562.1| 421|Homo sapiens forkhead transcription
factor HFH-4 protein.
Length = 421
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVSS 147
P +PP P+ P S G+P + +G+P +PG T +S
Sbjct: 50 PALPPGGTDPHGYHQVPGSAAPGSPLAADPACLGQPHTPGKPTSSCTS 97
>AF155108-1|AAD42874.1| 241|Homo sapiens NY-REN-41 antigen protein.
Length = 241
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYS---Q*GTAVGRPPSPGINTRCVSS 147
P+ P + RPRSRP+S P + G V R PSP + C +S
Sbjct: 51 PLPTPVSLLTCRPRSRPSSDSCSVPMTGARGQGLEVVRSPSPPLPLSCSNS 101
>Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein (VASP) protein.
Length = 380
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
P PP P P P P+G P + G G PP+P
Sbjct: 170 PPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAP 208
>X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 378
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
P PP P P P P+G P + G G PP+P
Sbjct: 168 PPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAP 206
>X07882-1|CAA30729.1| 226|Homo sapiens Po protein protein.
Length = 226
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
PP P +P++ PA P G P G GRPP P
Sbjct: 186 PPAGGNPQQPQAPPAGKPQGPPPPPQG---GRPPRP 218
>X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein.
Length = 234
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
PP P +P++ PA P G P G GRPP P
Sbjct: 194 PPPGGNPQQPQAPPAGKPQGPPPPPQG---GRPPRP 226
>K02576-1|AAA36503.1| 93|Homo sapiens protein ( Human salivary
proline-rich protein 1 gene, segment 2. ).
Length = 93
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPP 180
PP P +P++ PA P G P G RPP
Sbjct: 59 PPAGGNPQQPQAPPAGQPQGPPRPPQGDKPSRPP 92
>BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein.
Length = 183
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
PP P +P++ PA P G P G GRPP P
Sbjct: 138 PPPGGNPQQPQAPPAGKPQGPPPPPQG---GRPPRP 170
>BC117238-1|AAI17239.1| 676|Homo sapiens LIM domains containing 1
protein.
Length = 676
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 260 YRPRSRPASGPAGTPYSQ*GTAVGRPPSPG 171
Y S P+S PAG SQ G G P PG
Sbjct: 344 YLSSSAPSSSPAGLDGSQQGAVPGLGPKPG 373
>BC117236-1|AAI17237.1| 676|Homo sapiens LIM domains containing 1
protein.
Length = 676
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 260 YRPRSRPASGPAGTPYSQ*GTAVGRPPSPG 171
Y S P+S PAG SQ G G P PG
Sbjct: 344 YLSSSAPSSSPAGLDGSQQGAVPGLGPKPG 373
>BC058015-1|AAH58015.1| 197|Homo sapiens KALRN protein protein.
Length = 197
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Frame = +2
Query: 116 RKTWGSNDSSEKRHTWYLYPVKVGD----QQLFLIENREYRQGLKLDANV--AGTGPP 271
+K WG ++ E+ HT P+K+ D Q +E YR LK A G PP
Sbjct: 126 KKGWGEDEPDEESHTPLPPPMKIFDNDPTQDEMSLEGSSYRGSLKDPAGCLNEGMAPP 183
>BC046200-1|AAH46200.1| 251|Homo sapiens chromosome 17 open reading
frame 82 protein.
Length = 251
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGINTR 159
P +P PR+RP GP P A G+ P G+ R
Sbjct: 162 PQLPAGSTSGSEPRARPGLGPRQLPTGPRDGAAGQGPGRGLTAR 205
>BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
P PP P P P P+G P + G G PP+P
Sbjct: 170 PPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAP 208
>BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1
Query: 290 PVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
P PP P P P P+G P + G G PP+P
Sbjct: 171 PPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAP 209
>BC025959-1|AAH25959.1| 492|Homo sapiens dynein, cytoplasmic 1,
light intermediate chain 2 protein.
Length = 492
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 254 PRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVS 150
PR++ GPA P S GT+V + P P I S
Sbjct: 392 PRTQGRGGPASVPSSSPGTSV-KKPDPNIKNNAAS 425
>AJ312686-1|CAC35917.1| 503|Homo sapiens LIM domains containing 1
protein.
Length = 503
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 260 YRPRSRPASGPAGTPYSQ*GTAVGRPPSPG 171
Y S P+S PAG SQ G G P PG
Sbjct: 344 YLSSSAPSSSPAGLDGSQQGAVPGLGPKPG 373
>AJ132408-1|CAB63652.1| 676|Homo sapiens LIM domains containing
protein 1 protein.
Length = 676
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 260 YRPRSRPASGPAGTPYSQ*GTAVGRPPSPG 171
Y S P+S PAG SQ G G P PG
Sbjct: 344 YLSSSAPSSSPAGLDGSQQGAVPGLGPKPG 373
>AF035812-1|AAB88513.1| 492|Homo sapiens dynein light intermediate
chain 2 protein.
Length = 492
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 254 PRSRPASGPAGTPYSQ*GTAVGRPPSPGINTRCVS 150
PR++ GPA P S GT+V + P P I S
Sbjct: 392 PRTQGRGGPASVPSSSPGTSV-KKPDPNIKNNAAS 425
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,676,507
Number of Sequences: 237096
Number of extensions: 1618413
Number of successful extensions: 4901
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 4430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4881
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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