Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00052
(404 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA... 33 0.19
AY118976-1|AAM50836.2| 147|Drosophila melanogaster LP01241p pro... 31 0.77
X98094-3|CAA66722.1| 542|Drosophila melanogaster lethal(2)relat... 29 3.1
X95241-3|CAA64530.1| 542|Drosophila melanogaster l(2)rot protein. 29 3.1
X77821-1|CAA54836.1| 542|Drosophila melanogaster Rot(57) protein. 29 3.1
AE014296-3134|AAO41227.1| 405|Drosophila melanogaster CG9614-PH... 28 5.4
AY075425-1|AAL68241.1| 1234|Drosophila melanogaster LD46584p pro... 27 7.2
AJ011114-1|CAA09492.1| 1234|Drosophila melanogaster coatomer alp... 27 7.2
AE014296-317|AAF47535.1| 1234|Drosophila melanogaster CG7961-PB,... 27 7.2
AE014296-316|AAF47534.1| 1234|Drosophila melanogaster CG7961-PA,... 27 7.2
AY437926-1|AAR24077.1| 924|Drosophila melanogaster AMO protein. 27 9.5
AY283154-1|AAQ18122.1| 924|Drosophila melanogaster polycystin-2... 27 9.5
AY121712-1|AAM52039.1| 374|Drosophila melanogaster RH64567p pro... 27 9.5
AY113357-1|AAM29362.1| 445|Drosophila melanogaster GM14473p pro... 27 9.5
AE014297-2460|AAN13763.1| 445|Drosophila melanogaster CG7187-PC... 27 9.5
AE014297-2459|AAN13762.1| 445|Drosophila melanogaster CG7187-PB... 27 9.5
AE014297-2458|AAF55508.1| 445|Drosophila melanogaster CG7187-PA... 27 9.5
AE014134-2193|AAF53183.2| 924|Drosophila melanogaster CG6504-PA... 27 9.5
AE013599-2991|AAF57486.1| 374|Drosophila melanogaster CG9090-PA... 27 9.5
>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
protein.
Length = 4498
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 10/57 (17%)
Frame = -1
Query: 266 VPYRPRSRPASGPAG--TPYSQ*GT-----AVGRPP---SPGINTRCVSSHWNHSIP 126
VPY PR+RP++ G TP ++ GT V RPP SP + + V+S + + P
Sbjct: 3698 VPYNPRNRPSNSANGNSTPSNRFGTTKRPRVVNRPPGVASPNLTLKPVASDYERTTP 3754
>AY118976-1|AAM50836.2| 147|Drosophila melanogaster LP01241p
protein.
Length = 147
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -1
Query: 290 PVIPP---HKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPP 180
P +PP K VP PRS P S P T + A PP
Sbjct: 23 PTVPPPTTRKLVPTSPRSAPTSSPRATTTTSTRPATASPP 62
>X98094-3|CAA66722.1| 542|Drosophila melanogaster lethal(2)relative
of tid protein.
Length = 542
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Frame = -2
Query: 256 GHVRVQLQALP---VLPILNE--EQLLVAHLHRV*IP 161
GHVRV + AL V P+ E EQLL AHLH +P
Sbjct: 224 GHVRVHIGALAPEVVAPLHAERDEQLLAAHLHAHRLP 260
>X95241-3|CAA64530.1| 542|Drosophila melanogaster l(2)rot protein.
Length = 542
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Frame = -2
Query: 256 GHVRVQLQALP---VLPILNE--EQLLVAHLHRV*IP 161
GHVRV + AL V P+ E EQLL AHLH +P
Sbjct: 224 GHVRVHIGALAPEVVAPLHAERDEQLLAAHLHAHRLP 260
>X77821-1|CAA54836.1| 542|Drosophila melanogaster Rot(57) protein.
Length = 542
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Frame = -2
Query: 256 GHVRVQLQALP---VLPILNE--EQLLVAHLHRV*IP 161
GHVRV + AL V P+ E EQLL AHLH +P
Sbjct: 224 GHVRVHIGALAPEVVAPLHAERDEQLLAAHLHAHRLP 260
>AE014296-3134|AAO41227.1| 405|Drosophila melanogaster CG9614-PH,
isoform H protein.
Length = 405
Score = 27.9 bits (59), Expect = 5.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -1
Query: 401 FFFFCSDKVYYNMVRCRRVSLPRLDY 324
F++FC ++Y + +R L RL++
Sbjct: 379 FYYFCKQRLYMQYIALKRTELERLNF 404
>AY075425-1|AAL68241.1| 1234|Drosophila melanogaster LD46584p protein.
Length = 1234
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 222 YSLFSMRNSCWSPTFTGYKYQVCLFSLESFDPQ 124
++ F++ W P + G C F SFDPQ
Sbjct: 1173 FNPFTICGISWKPLYRGKPEVTCPFCSSSFDPQ 1205
>AJ011114-1|CAA09492.1| 1234|Drosophila melanogaster coatomer alpha
subunit protein.
Length = 1234
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 222 YSLFSMRNSCWSPTFTGYKYQVCLFSLESFDPQ 124
++ F++ W P + G C F SFDPQ
Sbjct: 1173 FNPFTICGISWKPLYRGKPEVTCPFCSSSFDPQ 1205
>AE014296-317|AAF47535.1| 1234|Drosophila melanogaster CG7961-PB,
isoform B protein.
Length = 1234
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 222 YSLFSMRNSCWSPTFTGYKYQVCLFSLESFDPQ 124
++ F++ W P + G C F SFDPQ
Sbjct: 1173 FNPFTICGISWKPLYRGKPEVTCPFCSSSFDPQ 1205
>AE014296-316|AAF47534.1| 1234|Drosophila melanogaster CG7961-PA,
isoform A protein.
Length = 1234
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 222 YSLFSMRNSCWSPTFTGYKYQVCLFSLESFDPQ 124
++ F++ W P + G C F SFDPQ
Sbjct: 1173 FNPFTICGISWKPLYRGKPEVTCPFCSSSFDPQ 1205
>AY437926-1|AAR24077.1| 924|Drosophila melanogaster AMO protein.
Length = 924
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 308 GVVGDCPVIPPHKAVPYRPRSRPASGPAGTP 216
G G P PP P P++ P + P GTP
Sbjct: 5 GQSGRSPSGPPGPPPPRPPKTPPGASPRGTP 35
>AY283154-1|AAQ18122.1| 924|Drosophila melanogaster polycystin-2
protein.
Length = 924
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 308 GVVGDCPVIPPHKAVPYRPRSRPASGPAGTP 216
G G P PP P P++ P + P GTP
Sbjct: 5 GQSGRSPSGPPGPPPPRPPKTPPGASPRGTP 35
>AY121712-1|AAM52039.1| 374|Drosophila melanogaster RH64567p
protein.
Length = 374
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = -3
Query: 258 PATFASSFRPCRYSLFS--MRNSC--WSPTFTGYKYQ-VCLFSLESFDPQVF 118
PA + S F R SL +R W+PTF GY Q +C F L +V+
Sbjct: 107 PAKYKSVFTGFRISLAEEGVRGLAKGWAPTFIGYSMQGLCKFGLYEVFKKVY 158
>AY113357-1|AAM29362.1| 445|Drosophila melanogaster GM14473p
protein.
Length = 445
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 242 PASGPAGTPYSQ*GTAVGRPPSPGINTRCVSSHWNHSIP 126
PA GP G P G A GRPP N + ++ S P
Sbjct: 248 PAPGPGGMPPMGMGGAGGRPPQWQPNASAPLNAYSSSSP 286
>AE014297-2460|AAN13763.1| 445|Drosophila melanogaster CG7187-PC,
isoform C protein.
Length = 445
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 242 PASGPAGTPYSQ*GTAVGRPPSPGINTRCVSSHWNHSIP 126
PA GP G P G A GRPP N + ++ S P
Sbjct: 248 PAPGPGGMPPMGMGGAGGRPPQWQPNASAPLNAYSSSSP 286
>AE014297-2459|AAN13762.1| 445|Drosophila melanogaster CG7187-PB,
isoform B protein.
Length = 445
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 242 PASGPAGTPYSQ*GTAVGRPPSPGINTRCVSSHWNHSIP 126
PA GP G P G A GRPP N + ++ S P
Sbjct: 248 PAPGPGGMPPMGMGGAGGRPPQWQPNASAPLNAYSSSSP 286
>AE014297-2458|AAF55508.1| 445|Drosophila melanogaster CG7187-PA,
isoform A protein.
Length = 445
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 242 PASGPAGTPYSQ*GTAVGRPPSPGINTRCVSSHWNHSIP 126
PA GP G P G A GRPP N + ++ S P
Sbjct: 248 PAPGPGGMPPMGMGGAGGRPPQWQPNASAPLNAYSSSSP 286
>AE014134-2193|AAF53183.2| 924|Drosophila melanogaster CG6504-PA
protein.
Length = 924
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 308 GVVGDCPVIPPHKAVPYRPRSRPASGPAGTP 216
G G P PP P P++ P + P GTP
Sbjct: 5 GQSGRSPSGPPGPPPPRPPKTPPGASPRGTP 35
>AE013599-2991|AAF57486.1| 374|Drosophila melanogaster CG9090-PA
protein.
Length = 374
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = -3
Query: 258 PATFASSFRPCRYSLFS--MRNSC--WSPTFTGYKYQ-VCLFSLESFDPQVF 118
PA + S F R SL +R W+PTF GY Q +C F L +V+
Sbjct: 107 PAKYKSVFTGFRISLAEEGVRGLAKGWAPTFIGYSMQGLCKFGLYEVFKKVY 158
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,617,218
Number of Sequences: 53049
Number of extensions: 455167
Number of successful extensions: 1476
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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