Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00052
(404 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039042-1|AAP40514.1| 368|Caenorhabditis elegans Serpentine re... 30 0.73
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 2.2
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 28 2.2
AL032656-3|CAD12890.1| 731|Caenorhabditis elegans Hypothetical ... 28 2.2
AF416781-1|AAL38510.1| 731|Caenorhabditis elegans PH domain pro... 28 2.2
AF324505-1|AAL49495.1| 731|Caenorhabditis elegans CED-12 protein. 28 2.2
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 28 2.9
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 28 2.9
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 28 2.9
Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 27 3.9
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 27 3.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 27 3.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 27 3.9
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 3.9
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 3.9
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 3.9
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 3.9
AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 27 3.9
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 27 3.9
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z47809-7|CAA87783.1| 662|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z47808-10|CAA87778.1| 662|Caenorhabditis elegans Hypothetical p... 27 6.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 26 9.0
AL031632-5|CAE11314.1| 324|Caenorhabditis elegans Hypothetical ... 26 9.0
AF016415-2|AAW88413.1| 296|Caenorhabditis elegans Serpentine re... 26 9.0
>AF039042-1|AAP40514.1| 368|Caenorhabditis elegans Serpentine
receptor, class w protein103 protein.
Length = 368
Score = 29.9 bits (64), Expect = 0.73
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -3
Query: 168 KYQVCLFSLESFDPQVFLSPYLSTFTSSFKYISCSVFSILKMTLLFSQREMSR 10
++ V L + D Q L YL+ K+I C FSIL + LL + +++ +
Sbjct: 195 QFSVMLNDFFNSDDQFVLRSYLTVDAVVTKFIPCVAFSILTVLLLHALQKLKK 247
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -1
Query: 293 CPVIPPHKAVPYRPRSRPAS-GPAGTPYSQ*GTAVGRPPSP 174
CP PP P P GPAG+P G PP P
Sbjct: 165 CPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGP 205
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
DCP PP + P + SG G P G+A+ PP P
Sbjct: 207 DCPAGPPGPSGA--PGQKGPSGAPGAPGQSGGSALPGPPGP 245
>AL032656-3|CAD12890.1| 731|Caenorhabditis elegans Hypothetical
protein Y106G6E.5 protein.
Length = 731
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 34 QQRHLQDTEHRTRDVLETGRERG--QIWRQEDLGIE*FQ 144
++R +QD E + D LET R +IWR+E LG E Q
Sbjct: 486 KRREIQDVEELSAD-LETFSYRAMQEIWREEQLGKENIQ 523
>AF416781-1|AAL38510.1| 731|Caenorhabditis elegans PH domain
protein CED-12 protein.
Length = 731
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 34 QQRHLQDTEHRTRDVLETGRERG--QIWRQEDLGIE*FQ 144
++R +QD E + D LET R +IWR+E LG E Q
Sbjct: 486 KRREIQDVEELSAD-LETFSYRAMQEIWREEQLGKENIQ 523
>AF324505-1|AAL49495.1| 731|Caenorhabditis elegans CED-12 protein.
Length = 731
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 34 QQRHLQDTEHRTRDVLETGRERG--QIWRQEDLGIE*FQ 144
++R +QD E + D LET R +IWR+E LG E Q
Sbjct: 486 KRREIQDVEELSAD-LETFSYRAMQEIWREEQLGKENIQ 523
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -3
Query: 240 SFRPCRYSLFSMRNSCWSPTFTGYKYQVCLFSLESFDPQVFLSPYLSTFTS 88
+FR +Y L+S SPT G + L+S ESF P L+ + S + S
Sbjct: 2281 AFRIVQYQLYS------SPTDLGRSDALRLYSSESFAPMALLADFRSDYQS 2325
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
DCP PP + P + SG G P G A+ PP P
Sbjct: 172 DCPAGPPGPSGA--PGQKGPSGAPGAPGQSGGAALPGPPGP 210
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
DCP PP + P + SG G P G A+ PP P
Sbjct: 172 DCPAGPPGPSGA--PGQKGPSGAPGAPGQSGGAALPGPPGP 210
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
DCP PP + P + SG G P G A+ PP P
Sbjct: 172 DCPAGPPGPSGA--PGQKGPSGAPGAPGQSGGAALPGPPGP 210
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
DCP PP + P + SG G P G A+ PP P
Sbjct: 172 DCPAGPPGPSGA--PGQKGPSGAPGAPGQSGGAALPGPPGP 210
>Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical
protein Y57G11C.24h protein.
Length = 740
Score = 27.5 bits (58), Expect = 3.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 278 PHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRP-PSPGINTRCVSSHWNHSIPRS 120
P PY+ SRP+ P G Y++ T G+P PSP + + SSH +P S
Sbjct: 9 PPSGDPYQ--SRPS--PGGYYYNR-STPGGQPAPSPSHSQQSASSHHPRGVPMS 57
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 27.5 bits (58), Expect = 3.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 278 PHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRP-PSPGINTRCVSSHWNHSIPRS 120
P PY+ SRP+ P G Y++ T G+P PSP + + SSH +P S
Sbjct: 9 PPSGDPYQ--SRPS--PGGYYYNR-STPGGQPAPSPSHSQQSASSHHPRGVPMS 57
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 293 CPVIPPHKAVPYRPRSRPASGPAGTP 216
CP +PP P P + P GP+ P
Sbjct: 81 CPYVPPAPLPPPPPPASPCCGPSPVP 106
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 27.5 bits (58), Expect = 3.9
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPGIN 165
DCP PP A P P+ GP G P S G+P +PG N
Sbjct: 155 DCPAGPPGPAGPAGPK-----GPNGNPGSD-----GQPGAPGNN 188
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -1
Query: 281 PPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPP 180
PP PY ++ PA P PY Q PP
Sbjct: 50 PPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPP 83
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 19 LSLGKQQRHLQDTEHRTRDVLETGRERGQIWRQ 117
L++GKQ+R L + E+ R + + +ER Q+ R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 19 LSLGKQQRHLQDTEHRTRDVLETGRERGQIWRQ 117
L++GKQ+R L + E+ R + + +ER Q+ R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 19 LSLGKQQRHLQDTEHRTRDVLETGRERGQIWRQ 117
L++GKQ+R L + E+ R + + +ER Q+ R+
Sbjct: 1244 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1276
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 19 LSLGKQQRHLQDTEHRTRDVLETGRERGQIWRQ 117
L++GKQ+R L + E+ R + + +ER Q+ R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516
>AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant B
protein.
Length = 740
Score = 27.5 bits (58), Expect = 3.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 278 PHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRP-PSPGINTRCVSSHWNHSIPRS 120
P PY+ SRP+ P G Y++ T G+P PSP + + SSH +P S
Sbjct: 9 PPSGDPYQ--SRPS--PGGYYYNR-STPGGQPAPSPSHSQQSASSHHPRGVPMS 57
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 27.5 bits (58), Expect = 3.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 278 PHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRP-PSPGINTRCVSSHWNHSIPRS 120
P PY+ SRP+ P G Y++ T G+P PSP + + SSH +P S
Sbjct: 9 PPSGDPYQ--SRPS--PGGYYYNR-STPGGQPAPSPSHSQQSASSHHPRGVPMS 57
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
DCP PP + P + SG G P G ++ PP P
Sbjct: 173 DCPAGPPGPSGA--PGQKGPSGAPGAPGQSGGASLPGPPGP 211
>Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical
protein M195.1 protein.
Length = 304
Score = 26.6 bits (56), Expect = 6.8
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSPG 171
DCP PP A P+ P G AG P + G A G P +PG
Sbjct: 159 DCPAGPPGPAGNAGPKGAP--GNAGAPGND-GQA-GAPGAPG 196
>Z47809-7|CAA87783.1| 662|Caenorhabditis elegans Hypothetical
protein D2013.9 protein.
Length = 662
Score = 26.6 bits (56), Expect = 6.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 276 WGNNGTVADNPEYYGFIIQPW 338
W +N A +PE+ +I QPW
Sbjct: 255 WASNVITAQHPEWRKYIEQPW 275
>Z47808-10|CAA87778.1| 662|Caenorhabditis elegans Hypothetical
protein D2013.9 protein.
Length = 662
Score = 26.6 bits (56), Expect = 6.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 276 WGNNGTVADNPEYYGFIIQPW 338
W +N A +PE+ +I QPW
Sbjct: 255 WASNVITAQHPEWRKYIEQPW 275
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 26.6 bits (56), Expect = 6.8
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -1
Query: 299 GDCPVIPPHKAVPYRP--RSRPASGPAGTPYSQ*GTAVGRPPSP 174
G P PP VP P RS P P TP S PPSP
Sbjct: 135 GSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
>Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical
protein F25H9.5 protein.
Length = 504
Score = 26.2 bits (55), Expect = 9.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 11 RLISLWENNNVIFKILNTEHEMYLKLDVNVDRYGDRKTWGSNDSSEKR 154
RL+S W+N + I EH++ ++L N YG W S KR
Sbjct: 282 RLLSEWKNISKIGDKSKKEHDLLMELTQNSSCYG--AAWFSAHIEVKR 327
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 296 DCPVIPPHKAVPYRPRSRPASGPAGTPYSQ*GTAVGRPPSP 174
DCP PP + P + SG G P G ++ PP P
Sbjct: 169 DCPAGPPGPSGA--PGQKGPSGAPGVPGQTGGASLPGPPGP 207
>AL031632-5|CAE11314.1| 324|Caenorhabditis elegans Hypothetical
protein Y32B12B.7 protein.
Length = 324
Score = 26.2 bits (55), Expect = 9.0
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = -3
Query: 279 PTQGGPVPATFASSF--RPCRYSLFSMRNSCWSPTFTGYKYQVCLFSLESFDPQVFLSPY 106
P GP PA F + ++R + TG C Q+F+ +
Sbjct: 57 PNPNGPHPAIFRQFIVMQAMCVCHVTIRLLTFRIPLTGLMTSWCASEEPMSTLQLFV--F 114
Query: 105 LSTFTSSFKYISCSVFSILKMTLLFSQREMSRQL 4
++T + KYIS +F L++ LLFS ++ ++
Sbjct: 115 MNTGVAYGKYISIILFCFLRVVLLFSLDHVTEKI 148
>AF016415-2|AAW88413.1| 296|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 29 protein.
Length = 296
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 129 PQVFLSPYLSTFTSSFKYISCSVFSILKMTLLFSQREMSRQL 4
P +F L FT+ K I C++ S + +LL+ + S ++
Sbjct: 242 PNIFSIEVLGPFTAVMKTIGCAIESTVVSSLLYFGKPKSAKM 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,867,740
Number of Sequences: 27780
Number of extensions: 231505
Number of successful extensions: 722
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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