Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00049
         (744 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2195|AAF55305.1|   60|Drosophila melanogaster CG17931-P...    44   2e-04
AE014297-2194|AAN13706.2|  118|Drosophila melanogaster CG17931-P...    40   0.004

>AE014297-2195|AAF55305.1|   60|Drosophila melanogaster CG17931-PA,
           isoform A protein.
          Length = 60

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 20/31 (64%), Positives = 22/31 (70%)
 Frame = +1

Query: 142 MTRGNQRDLARAKNQKKQVEMQKKKNASEKT 234
           MTRGNQRDLAR KNQKKQ ++ K K     T
Sbjct: 1   MTRGNQRDLARQKNQKKQADLTKGKRTDNLT 31


>AE014297-2194|AAN13706.2|  118|Drosophila melanogaster CG17931-PB,
           isoform B protein.
          Length = 118

 Score = 39.9 bits (89), Expect = 0.004
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = +1

Query: 142 MTRGNQRDLARAKNQKKQVEMQKKKNASEKT 234
           M  GNQRDLAR KNQKKQ ++ K K     T
Sbjct: 59  MVSGNQRDLARQKNQKKQADLTKGKRTDNLT 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,636,406
Number of Sequences: 53049
Number of extensions: 433238
Number of successful extensions: 880
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)