Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00048
(410 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 140 2e-33
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 140 2e-33
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 140 2e-33
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 140 2e-33
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 140 2e-33
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 140 2e-33
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 140 2e-33
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 138 5e-33
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 138 7e-33
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 130 2e-30
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 129 3e-30
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 39 0.007
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 38 0.010
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 35 0.12
Z84488-2|CAI23408.1| 958|Homo sapiens squamous cell carcinoma a... 33 0.49
BC039245-1|AAH39245.1| 958|Homo sapiens dermatan sulfate epimer... 33 0.49
AF098066-1|AAF00087.1| 958|Homo sapiens squamous cell carcinoma... 33 0.49
CR533511-1|CAG38542.1| 344|Homo sapiens ZDHHC4 protein. 29 4.5
BC001239-1|AAH01239.1| 344|Homo sapiens ZDHHC4 protein protein. 29 4.5
AY359090-1|AAQ89448.1| 344|Homo sapiens ZDHHC4 protein. 29 4.5
AK223532-1|BAD97252.1| 344|Homo sapiens zinc finger, DHHC domai... 29 4.5
AK001341-1|BAA91636.1| 344|Homo sapiens protein ( Homo sapiens ... 29 4.5
AF201931-1|AAF86867.1| 344|Homo sapiens DC1 protein. 29 4.5
BC067905-1|AAH67905.1| 246|Homo sapiens monocyte to macrophage ... 29 6.0
BC037881-1|AAH37881.2| 270|Homo sapiens MMD2 protein protein. 29 6.0
AY424288-1|AAR08376.1| 246|Homo sapiens progestin and adipoQ re... 29 6.0
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 140 bits (339), Expect = 2e-33
Identities = 62/83 (74%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV++AAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 140 bits (339), Expect = 2e-33
Identities = 62/83 (74%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV++AAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 140 bits (339), Expect = 2e-33
Identities = 62/83 (74%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV++AAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 140 bits (339), Expect = 2e-33
Identities = 62/83 (74%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV++AAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 140 bits (339), Expect = 2e-33
Identities = 62/83 (74%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV++AAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 140 bits (339), Expect = 2e-33
Identities = 62/83 (74%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV++AAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 140 bits (339), Expect = 2e-33
Identities = 62/83 (74%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV++AAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 138 bits (335), Expect = 5e-33
Identities = 61/83 (73%), Positives = 72/83 (86%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV++AAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSC +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCVIHSKV 83
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 138 bits (334), Expect = 7e-33
Identities = 61/83 (73%), Positives = 72/83 (86%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIV++AAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 130 bits (314), Expect = 2e-30
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIV++AAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ + RTPP
Sbjct: 79 IHSKVVRNRSREACKDRTPP 98
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 129 bits (312), Expect = 3e-30
Identities = 58/83 (69%), Positives = 69/83 (83%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIV++AAVRDI++ASV+
Sbjct: 1 MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKL KLHYCVSC +K+
Sbjct: 61 AYVLPKLCVKLHYCVSCVIHSKV 83
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 38.7 bits (86), Expect = 0.007
Identities = 17/22 (77%), Positives = 22/22 (100%)
Frame = +3
Query: 132 KFVIRNIVDSAAVRDINDASVY 197
KFVIRNIV++AAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 38.3 bits (85), Expect = 0.010
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 204 FQLPKLYAKLHYCVSCASTAKL 269
+ LPKLY KLHYCVSCA +K+
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKV 22
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPP 313
+HSKVVRNRS++ R+ RTPP
Sbjct: 18 IHSKVVRNRSREARKDRTPP 37
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVK 77
MT+K RN GRAK GRGHV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQ 19
>Z84488-2|CAI23408.1| 958|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 2 protein.
Length = 958
Score = 32.7 bits (71), Expect = 0.49
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +3
Query: 114 KDKAIKKFVIRNIVDSAAVRDINDASVYPMFQL--PKLYAKLHYCVSCASTAK--LSGTD 281
++ AIK ++ + D AA+ + N P+FQL ++ +++ S TA+ L +D
Sbjct: 723 RNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSD 782
Query: 282 RRKTEESV 305
+R+TEE++
Sbjct: 783 KRQTEEAI 790
>BC039245-1|AAH39245.1| 958|Homo sapiens dermatan sulfate epimerase
protein.
Length = 958
Score = 32.7 bits (71), Expect = 0.49
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +3
Query: 114 KDKAIKKFVIRNIVDSAAVRDINDASVYPMFQL--PKLYAKLHYCVSCASTAK--LSGTD 281
++ AIK ++ + D AA+ + N P+FQL ++ +++ S TA+ L +D
Sbjct: 723 RNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSD 782
Query: 282 RRKTEESV 305
+R+TEE++
Sbjct: 783 KRQTEEAI 790
>AF098066-1|AAF00087.1| 958|Homo sapiens squamous cell carcinoma
antigen recognized by T cell protein.
Length = 958
Score = 32.7 bits (71), Expect = 0.49
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +3
Query: 114 KDKAIKKFVIRNIVDSAAVRDINDASVYPMFQL--PKLYAKLHYCVSCASTAK--LSGTD 281
++ AIK ++ + D AA+ + N P+FQL ++ +++ S TA+ L +D
Sbjct: 723 RNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSD 782
Query: 282 RRKTEESV 305
+R+TEE++
Sbjct: 783 KRQTEEAI 790
>CR533511-1|CAG38542.1| 344|Homo sapiens ZDHHC4 protein.
Length = 344
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 217 LGSWNIGYTEASLISLTAAESTMFLI-TNFLIAL 119
+G+WNI Y +++LTA+ +T+ ++ T FL+ L
Sbjct: 186 IGAWNIRYFLIYVLTLTASAATVAIVSTTFLVHL 219
>BC001239-1|AAH01239.1| 344|Homo sapiens ZDHHC4 protein protein.
Length = 344
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 217 LGSWNIGYTEASLISLTAAESTMFLI-TNFLIAL 119
+G+WNI Y +++LTA+ +T+ ++ T FL+ L
Sbjct: 186 IGAWNIRYFLIYVLTLTASAATVAIVSTTFLVHL 219
>AY359090-1|AAQ89448.1| 344|Homo sapiens ZDHHC4 protein.
Length = 344
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 217 LGSWNIGYTEASLISLTAAESTMFLI-TNFLIAL 119
+G+WNI Y +++LTA+ +T+ ++ T FL+ L
Sbjct: 186 IGAWNIRYFLIYVLTLTASAATVAIVSTTFLVHL 219
>AK223532-1|BAD97252.1| 344|Homo sapiens zinc finger, DHHC domain
containing 4 variant protein.
Length = 344
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 217 LGSWNIGYTEASLISLTAAESTMFLI-TNFLIAL 119
+G+WNI Y +++LTA+ +T+ ++ T FL+ L
Sbjct: 186 IGAWNIRYFLIYVLTLTASAATVAIVSTTFLVHL 219
>AK001341-1|BAA91636.1| 344|Homo sapiens protein ( Homo sapiens
cDNA FLJ10479 fis, clone NT2RP2000120. ).
Length = 344
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 217 LGSWNIGYTEASLISLTAAESTMFLI-TNFLIAL 119
+G+WNI Y +++LTA+ +T+ ++ T FL+ L
Sbjct: 186 IGAWNIRYFLIYVLTLTASAATVAIVSTTFLVHL 219
>AF201931-1|AAF86867.1| 344|Homo sapiens DC1 protein.
Length = 344
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 217 LGSWNIGYTEASLISLTAAESTMFLI-TNFLIAL 119
+G+WNI Y +++LTA+ +T+ ++ T FL+ L
Sbjct: 186 IGAWNIRYFLIYVLTLTASAATVAIVSTTFLVHL 219
>BC067905-1|AAH67905.1| 246|Homo sapiens monocyte to macrophage
differentiation-associated 2 protein.
Length = 246
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 149 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITXLT 27
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>BC037881-1|AAH37881.2| 270|Homo sapiens MMD2 protein protein.
Length = 270
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 149 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITXLT 27
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>AY424288-1|AAR08376.1| 246|Homo sapiens progestin and adipoQ
receptor family member X protein.
Length = 246
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 149 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITXLT 27
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,845,332
Number of Sequences: 237096
Number of extensions: 946090
Number of successful extensions: 5987
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5987
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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