Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00048
(410 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal prot... 144 5e-35
X13625-1|CAB38441.1| 114|Drosophila melanogaster protein ( Dros... 144 5e-35
AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p pro... 144 5e-35
AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-P... 144 5e-35
AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-P... 144 5e-35
AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-P... 144 5e-35
AY070900-1|AAL48522.1| 463|Drosophila melanogaster RE01590p pro... 28 4.2
AE014134-1736|AAF52836.1| 463|Drosophila melanogaster CG13126-P... 28 4.2
AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p pro... 28 5.5
AF305875-1|AAK55517.1| 1060|Drosophila melanogaster putative thr... 28 5.5
AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-P... 28 5.5
AE014134-1143|AAF52425.2| 1060|Drosophila melanogaster CG11326-P... 28 5.5
BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p pro... 27 9.7
AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-P... 27 9.7
>X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal protein
S31 protein.
Length = 114
Score = 144 bits (348), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIV++AAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLYAKLHYCVSCA +K+
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKV 83
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 343
+HSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 79 IHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>X13625-1|CAB38441.1| 114|Drosophila melanogaster protein (
Drosophila melanogastermRNA for putative ribosomal
protein S31. ).
Length = 114
Score = 144 bits (348), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIV++AAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLYAKLHYCVSCA +K+
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKV 83
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 343
+HSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 79 IHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p
protein.
Length = 114
Score = 144 bits (348), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIV++AAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLYAKLHYCVSCA +K+
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKV 83
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 343
+HSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 79 IHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-PC,
isoform C protein.
Length = 114
Score = 144 bits (348), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIV++AAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLYAKLHYCVSCA +K+
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKV 83
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 343
+HSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 79 IHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-PB,
isoform B protein.
Length = 114
Score = 144 bits (348), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIV++AAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLYAKLHYCVSCA +K+
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKV 83
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 343
+HSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 79 IHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-PA,
isoform A protein.
Length = 114
Score = 144 bits (348), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 21 MTRKXRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVDSAAVRDINDASVYP 200
MT+K RNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIV++AAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 201 MFQLPKLYAKLHYCVSCASTAKL 269
+ LPKLYAKLHYCVSCA +K+
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKV 83
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 343
+HSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 79 IHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>AY070900-1|AAL48522.1| 463|Drosophila melanogaster RE01590p
protein.
Length = 463
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 108 RTARSLCISQL*RDHVHAWRVLHYGAYES 22
R R L I++ ++AW+ + YGAYES
Sbjct: 131 RRKRELEINKRLGQRIYAWKRIEYGAYES 159
>AE014134-1736|AAF52836.1| 463|Drosophila melanogaster CG13126-PA
protein.
Length = 463
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 108 RTARSLCISQL*RDHVHAWRVLHYGAYES 22
R R L I++ ++AW+ + YGAYES
Sbjct: 131 RRKRELEINKRLGQRIYAWKRIEYGAYES 159
>AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p
protein.
Length = 664
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 48 RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 149
+A H G V V+CT C R + +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498
>AF305875-1|AAK55517.1| 1060|Drosophila melanogaster putative
thrombospondin protein.
Length = 1060
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 222 YAKLHYCVSCASTAKLSGTDRRKTEESVLLPRVTSLGTC 338
Y +C+SC +++GT R E +L L TC
Sbjct: 399 YPPYFHCISCPMGHEVNGTSCRDMNECLLYDPCDELATC 437
>AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-PA
protein.
Length = 664
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 48 RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 149
+A H G V V+CT C R + +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498
>AE014134-1143|AAF52425.2| 1060|Drosophila melanogaster CG11326-PA,
isoform A protein.
Length = 1060
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 222 YAKLHYCVSCASTAKLSGTDRRKTEESVLLPRVTSLGTC 338
Y +C+SC +++GT R E +L L TC
Sbjct: 399 YPPYFHCISCPMGHEVNGTSCRDMNECLLYDPCDELATC 437
>BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p
protein.
Length = 822
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 272 RNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 361
R+RS++DR R P+ PRD R ++ +R
Sbjct: 52 RSRSREDRNRRRSPERQRPRDNVRERSRER 81
>AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-PA
protein.
Length = 822
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 272 RNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 361
R+RS++DR R P+ PRD R ++ +R
Sbjct: 52 RSRSREDRNRRRSPERQRPRDNVRERSRER 81
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,151,098
Number of Sequences: 53049
Number of extensions: 300626
Number of successful extensions: 907
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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