Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00047
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   134   5e-32
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    69   4e-12
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    35   0.056
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical ...    27   8.6  
AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  134 bits (324), Expect = 5e-32
 Identities = 59/87 (67%), Positives = 69/87 (79%)
 Frame = +2

Query: 248 QRLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQV 427
           Q L  +PFFP L++YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ 
Sbjct: 53  QDLKDKPFFPSLIEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQT 112

Query: 428 GRNIIHGSDSVESAKKEIGLWFTDKEV 508
           GRNI HGSD+V+SA +EI  WF  +E+
Sbjct: 113 GRNICHGSDAVDSANREIAHWFKQEEI 139



 Score = 67.3 bits (157), Expect = 9e-12
 Identities = 31/50 (62%), Positives = 38/50 (76%)
 Frame = +3

Query: 105 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSD 254
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY D
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQD 54


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 37/79 (46%), Positives = 48/79 (60%)
 Frame = +2

Query: 263 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNII 442
           +PFFP L+ YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 443 HGSDSVESAKKEIGLWFTD 499
           H SDSV SA +E  LWF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 34.7 bits (76), Expect = 0.056
 Identities = 25/74 (33%), Positives = 37/74 (50%)
 Frame = +2

Query: 269 FFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHG 448
           F+  LV+++SSGPV+ M   G      G   L        QP  IR    +   RN+ H 
Sbjct: 66  FYDRLVRHISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHA 123

Query: 449 SDSVESAKKEIGLW 490
           SD  ++A+KE+ L+
Sbjct: 124 SDE-DAAEKELQLF 136


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 152 CGHHY*TFRKERLQTSRFEIRMAIRRTSPATLQRL 256
           CGH        R +T +FE R+ ++R+SP     L
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSPCATYEL 141


>AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2b protein.
          Length = 753

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = -2

Query: 628 YENVSFNHRMFNINYENKTKYTD*NKFTHKPSFHLQVSSPNFFVRKPEA---YFLFSRFN 458
           Y   + +     +N E+++  +  ++ TH PSF    S+ N  + +P +   +F    FN
Sbjct: 239 YNTATSHQSSERLNSESRSSRS--SQLTHNPSFDYSSSNHNTKLEQPNSHSPHFSSRAFN 296

Query: 457 AVRT 446
           AVR+
Sbjct: 297 AVRS 300


>AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2a protein.
          Length = 772

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = -2

Query: 628 YENVSFNHRMFNINYENKTKYTD*NKFTHKPSFHLQVSSPNFFVRKPEA---YFLFSRFN 458
           Y   + +     +N E+++  +  ++ TH PSF    S+ N  + +P +   +F    FN
Sbjct: 239 YNTATSHQSSERLNSESRSSRS--SQLTHNPSFDYSSSNHNTKLEQPNSHSPHFSSRAFN 296

Query: 457 AVRT 446
           AVR+
Sbjct: 297 AVRS 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,641,454
Number of Sequences: 27780
Number of extensions: 299908
Number of successful extensions: 827
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)