Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00046
(836 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 39 0.004
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 34 0.12
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 33 0.29
SB_50645| Best HMM Match : Syndecan (HMM E-Value=0.02) 33 0.29
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 33 0.29
SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_26950| Best HMM Match : TBC (HMM E-Value=5.2e-28) 32 0.50
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 32 0.66
SB_50834| Best HMM Match : GCR (HMM E-Value=2.5) 31 0.88
SB_28454| Best HMM Match : SDA1 (HMM E-Value=1.7) 31 0.88
SB_44228| Best HMM Match : LMP (HMM E-Value=0.11) 31 1.2
SB_51277| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_32608| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55) 30 2.0
SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12) 30 2.7
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 30 2.7
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17) 29 3.5
SB_56589| Best HMM Match : zf-C4_Topoisom (HMM E-Value=1.1) 29 3.5
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 29 4.7
SB_37953| Best HMM Match : Myco_haema (HMM E-Value=4.1) 29 4.7
SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8) 29 4.7
SB_1116| Best HMM Match : THAP (HMM E-Value=0.00013) 29 4.7
SB_29462| Best HMM Match : DUF753 (HMM E-Value=3.5) 29 6.2
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_5337| Best HMM Match : ResIII (HMM E-Value=2.4) 29 6.2
SB_35441| Best HMM Match : ResIII (HMM E-Value=0.078) 28 8.2
SB_26626| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 28 8.2
SB_49729| Best HMM Match : Vps54 (HMM E-Value=3.7) 28 8.2
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 28 8.2
SB_42323| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 28 8.2
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73) 28 8.2
>SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 344
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = +2
Query: 494 QTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNV 673
Q R+I+ S + ++P PR SP + TK TK A PR SPK + KP +
Sbjct: 257 QAGRKIKISKPQNHKQAPRPRQASPKTKGQASPKTKSTKPARPRQASPKAK--TSKPQDQ 314
Query: 674 PGYLRPTRTSQIKEET 721
+ R S +K +T
Sbjct: 315 DKQVARPRQSSLKTKT 330
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 515 ESPSRLST-ESPVPRSKSPIRHTVETVTTKITKSAA--PRGESPKQRPENDKPDNVPGYL 685
ESP ST E+P +S + T T T T+S P +S + PE + P
Sbjct: 99 ESPETQSTTETPETQSTTESPETQSTTQTPETQSTTETPETQSTTETPETQSTTDTPETQ 158
Query: 686 RPTRTSQIKEETIIHDTE 739
PT+T + + T +T+
Sbjct: 159 SPTQTPETQSTTTTPETQ 176
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +2
Query: 125 PTKHPEEIRHVTPDRSKETVKLHPKVKDFKTPTQKAADKTPIKIQH*GAANRQKS*SIIR 304
P H E TP K T ++HP + T T + TP ++ A R+ +
Sbjct: 843 PRLHAEYTHAYTPSTPKPTHRVHPSLHAGYTHTYTPSTPTPTHAEYTHAYTRRVHKRLHA 902
Query: 305 EYCIYYTKS 331
EY + YT S
Sbjct: 903 EYTLAYTPS 911
>SB_50645| Best HMM Match : Syndecan (HMM E-Value=0.02)
Length = 226
Score = 33.1 bits (72), Expect = 0.29
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 384 TPKPETLRHKNDHPNVTEDEVEMNTT--VIKTERSIESIKPQEEYAKVQVAYPQNHQSRD 557
T KP+ K P V +EVE+ T V TE+ E +KP E V P+N + D
Sbjct: 97 TRKPKPKDRKTKEPKVETEEVEITTAEPVKPTEKPTEFVKPTTE-DDVMETDPENPKEGD 155
Query: 558 LNHR 569
+ R
Sbjct: 156 MQAR 159
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 33.1 bits (72), Expect = 0.29
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +2
Query: 485 RINQTSRRIRESPSRLSTESPVPR-SKSPI--RHTVETVTTKITKSAA-PRGESPKQRPE 652
R SR S S+ + SP P+ +++ + RHT ++SA PRG P++RP
Sbjct: 448 RSRSYSRSRSRSFSKSISGSPTPKYTRTTVKPRHTDREPRRDFSRSAERPRGRPPRERPR 507
Query: 653 NDKPDNVPGYLRPTRTSQIKEETIIHDTEVSSRRGVE 763
+P + RP R Q ++ + D E R +E
Sbjct: 508 EIRPSR-ERFGRPERDRQERDRP-VRDRETYRDRELE 542
>SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 533 STESPVPRSKSPIRHTVETVTTKITKSAA--PRGESPKQRPENDKPDNVPGYLRPTRTSQ 706
+TE+P +S + T T TT T+S P +SP Q PE P T T +
Sbjct: 345 TTETPETQSTTTTPETQSTTTTPETQSTTETPETQSPTQTPETQLTTETPETQSTTTTPE 404
Query: 707 IKEETIIHDTE 739
+ T +T+
Sbjct: 405 TQSTTGTPETQ 415
>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.3 bits (70), Expect = 0.50
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 458 HSN*NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKI-TKSAAPRGES 634
HS+ N F N R+ RE P S +S V S S VET ++ KS P+ S
Sbjct: 841 HSSQNGDFETSNGKLRKKREKPKHNSPDSEVETSDSSSDDEVETSDRQLRRKSEKPKYNS 900
Query: 635 PKQRPE 652
P E
Sbjct: 901 PDSEGE 906
>SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +2
Query: 515 ESPS-RLSTESPVPR--SKSPIRHTVETVTTKITKSAA--PRGESPKQRPENDKPDNVP 676
E+P+ R S+E P R S++P + ET T K+ A P E+P RP ++ P P
Sbjct: 511 EAPTTRPSSEKPTTRPFSETPTSTSSETPTKTFNKTPATRPSSETPTTRPSSETPTTKP 569
>SB_26950| Best HMM Match : TBC (HMM E-Value=5.2e-28)
Length = 998
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +2
Query: 434 RGRS*DEHHSN*NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKS 613
R RS S R+ + I Q S S S + SP R +S HT++T+TT T S
Sbjct: 314 RQRSHSHIPSTQGRSRSAIKQESFDDERSSSDETKPSPATRRRS---HTLDTITTSPTPS 370
Query: 614 AAPRGES 634
P GE+
Sbjct: 371 LTPIGEA 377
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 31.9 bits (69), Expect = 0.66
Identities = 26/84 (30%), Positives = 33/84 (39%)
Frame = +2
Query: 569 IRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQIKEETIIHDTEVSS 748
+R+ TT TK AP+GE P P VPG P S I + E+
Sbjct: 982 VRYPDGRETTVSTKHLAPKGEVPTMYPLPQVKPTVPGEHHPATGSSPPSSEI--EVEIGV 1039
Query: 749 RRGVEFGVELRRRALNVLQRAVRG 820
V G E R + L R+V G
Sbjct: 1040 GEEVPQGTEARYKHFQ-LSRSVYG 1062
>SB_50834| Best HMM Match : GCR (HMM E-Value=2.5)
Length = 909
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 632 SPKQRPENDKPDNVPGYLRPTRTSQIKEETIIHDTEVSSRRGVEFGVELRRRALNVLQRA 811
SP+ RP DKP P RP+ Q K+ T++ +S + + V+LR R L LQ +
Sbjct: 291 SPEFRPL-DKPKGQPQGSRPSNEVQSKDSTVM----ISKTKLRKLDVKLRNRLLEYLQES 345
Query: 812 VRG 820
G
Sbjct: 346 PGG 348
>SB_28454| Best HMM Match : SDA1 (HMM E-Value=1.7)
Length = 383
Score = 31.5 bits (68), Expect = 0.88
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Frame = +2
Query: 485 RINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKI----------TKSAAPRGES 634
R+ S IRE LS P + + IR+T TK TK+ RG+S
Sbjct: 202 RVKDASNMIREM---LSEAVPKADTLTKIRYTPPKPKTKAITKVANDRYGTKTTNKRGKS 258
Query: 635 PKQRPENDKPDNVPGYLRPTRTSQIKEETIIHDTEVSS 748
P+Q N KP +PG+ + TR + +I + ++S
Sbjct: 259 PRQANRNVKP--MPGHAQATRGIEAHRAGVIGEHPLTS 294
>SB_44228| Best HMM Match : LMP (HMM E-Value=0.11)
Length = 276
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +3
Query: 426 NVTEDEVEMNTTVIKTERSIESIKPQEEYAKVQVAYPQNHQSRDLNHRSDILLKRSQRKL 605
N ED+V + + + E++IES + + +++ HQ L+ + + L + +
Sbjct: 176 NANEDKVTLKEQLKQMEQAIESQRQRHSDEIQRISAEHEHQCAKLSQKIESLSSEQEEAI 235
Query: 606 QNLLHQEGNLRSSGLKM 656
Q+L Q +KM
Sbjct: 236 QDLEKQLKKANKESVKM 252
>SB_51277| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +2
Query: 551 PRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQIKEETII 727
PR I H++E T + R P Q PDN PG L PT E I
Sbjct: 95 PRRLFMIDHSLEGWITNAVYTGISRVRHPDQIVRVIPPDNAPGTLAPTELQATPSEEFI 153
>SB_32608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 909
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Frame = +2
Query: 491 NQTSRRIRESPSRLSTESPVPRSKSPIRHTVETV-TTKITKSAAPRGESPKQRPENDKPD 667
NQT R+ PSR ++ S S+ P+ + E +T + E
Sbjct: 587 NQTDSRLDTGPSRTASSSKSQCSRDPLHSSSEDANSTGMLVGITQENERNSSEHSTRNSS 646
Query: 668 NVPGYLRPTRTSQIKEETIIHDTEVS 745
N GY RT T+ H + S
Sbjct: 647 NCEGYQSIRRTKSSATATLSHSFDSS 672
>SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55)
Length = 1087
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +2
Query: 518 SPSRLSTESPVPRSKSPIRHTVETVTTKIT-----KSAAPRGESPKQRPENDKPDNVPGY 682
SP + +T+ + +S RH + ++TT+ T S P SP P P P
Sbjct: 230 SPQKTATKPSTFQPQSSTRHPLTSITTRTTPIKPSPSTTPIKPSPSTTPIKPSPSTTPIK 289
Query: 683 LRPTRTS 703
P+ TS
Sbjct: 290 PSPSTTS 296
>SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12)
Length = 1020
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 518 SPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTR 697
SP + +T+ + +S RH + ++TT+ T P SP P P P P+
Sbjct: 306 SPQKTATKPSTFQPQSSTRHPLTSITTRTT----PIKPSPSTTPIKPSPSTTPIKPSPST 361
Query: 698 TS 703
TS
Sbjct: 362 TS 363
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.9 bits (64), Expect = 2.7
Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 5/162 (3%)
Frame = +3
Query: 201 LKISKHQPKKRLIKLRLRYNIKEQRTVK-KAKALFENIASXXXXXXXXXXXXXXXXXGVN 377
L++ K + IK+RL+ NIK R K K KA E I+S +
Sbjct: 273 LELDKAKKNFEKIKIRLKNNIKSTREEKEKMKAEIEKISS--EKHEICTKLRQEFEEALK 330
Query: 378 QKTPKPETLRHKNDHPNVTEDEVEMNTTV----IKTERSIESIKPQEEYAKVQVAYPQNH 545
K +LR + + +D + N E I+++ + A Y
Sbjct: 331 DKDDVLSSLREEMECLRAEKDSLVSNLDTRAEGSTIEEKIQAMDTERMVAASPGEYLNEA 390
Query: 546 QSRDLNHRSDILLKRSQRKLQNLLHQEGNLRSSGLKMTSLIT 671
S+D R + L+ QR+ + +L ++ +R + S+++
Sbjct: 391 HSQDEIERLKLELEVVQREKEQILEEKDRIREIVKEENSMVS 432
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 545 PVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPG 679
P+P KSP + + + + TK PR ES +Q +N KP G
Sbjct: 141 PIPSMKSPSQTAIRSPSQ--TKPP-PRSESKRQEQQNSKPTETRG 182
>SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 470 NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQ 643
N+ + +NQT +++SP R S E+ P + T K TK ++ + S K+
Sbjct: 186 NQKKSPLNQTIDHLKKSPKRSSHEAKSPTKSTSSHDTKSKSPCKATKESSSKVMSSKE 243
>SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17)
Length = 473
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 501 QEEYAKVQVAYPQNHQSRDLNHRSDILLKRSQRKLQNLLHQEGNLRSS 644
+EE+A++QV + ++ R LNH L R +QE +RSS
Sbjct: 7 EEEFARIQVDFQKHVIPRFLNHSFSCLRVECHRANNRSANQELRIRSS 54
>SB_56589| Best HMM Match : zf-C4_Topoisom (HMM E-Value=1.1)
Length = 743
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = +2
Query: 551 PRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQIKEETII 727
PR I H++E T + R Q PDN PG L PTR E +I
Sbjct: 389 PRRLFIIDHSLEGWITNAVYTGISRVRHADQIVRVISPDNTPGALVPTRLQATPSEELI 447
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +2
Query: 584 ETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQIKEETII--HDTEVSSRRG 757
E +++ ++ + +P+G K+RP + P ++PT + I E+ +RR
Sbjct: 30 EALSSSVSPTKSPKGTKGKKRPSSSSVFKSPKRIKPTENQSVSSNDNISQEHVEIITRRN 89
Query: 758 VE----FGVELRRRALNV 799
E RR+L +
Sbjct: 90 TRSKSVIVTEATRRSLRI 107
>SB_37953| Best HMM Match : Myco_haema (HMM E-Value=4.1)
Length = 838
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/91 (23%), Positives = 35/91 (38%)
Frame = +2
Query: 458 HSN*NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESP 637
+ N N N +N + I S T+ + P T +T T+K+T +A S
Sbjct: 743 NGNPNDLENLLNTDNETIGHSTIEQQTQFTDKPTDKP---TEQTPTSKVTSAAMETKSSG 799
Query: 638 KQRPENDKPDNVPGYLRPTRTSQIKEETIIH 730
KP+++ L PT + +H
Sbjct: 800 AHDDSGIKPEDIINKLSPTEGQSASQAPFVH 830
>SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8)
Length = 232
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +2
Query: 476 AFNRINQTSRRIRESPSRLS---TESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQR 646
+F ++T + S SR T +P P ++SP H+ E++ T + P +S
Sbjct: 77 SFTSKSETRESVTHSMSRFPAYRTVNPTPVTQSPTSHSHESIKTSSSTKNIPASKSQTLS 136
Query: 647 PENDKPDNVPGYLRPTRTSQIKEETIIHDTEV 742
+ V + PT T ++ T+V
Sbjct: 137 TR----ETVASEIMPTSTRTTTSHVVMPTTQV 164
>SB_1116| Best HMM Match : THAP (HMM E-Value=0.00013)
Length = 331
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 131 KHPEEIRHVTPDRSKETVKLHPKVKDFKTPTQKAADKTPIK 253
K P+E +P ++ T PK ++ KT T KA D P+K
Sbjct: 105 KRPDE----SPKDARTTHDTKPKTRNQKTATSKATDPRPVK 141
>SB_29462| Best HMM Match : DUF753 (HMM E-Value=3.5)
Length = 199
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 375 NQKTPKPETLRHKNDHPNVTEDEVEMNTTVIKTERSIESIKPQEEYAKVQVAYPQNHQSR 554
NQ T ETL +V E V++NT+ + RS+ S K ++ K+ ++ Q H+
Sbjct: 17 NQHTKLQETLPKIAKKDDVDETRVDVNTS---SRRSVSSKKLSKDVPKLSTSF-QEHECA 72
Query: 555 D 557
D
Sbjct: 73 D 73
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 440 RS*DEHHSN*NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAA 619
RS D+ S ++ R R +SP + +S RS+SP R E +TKS
Sbjct: 250 RSRDKSRSR-EKSRERGGSRGRSAEKSPEKQRDKSDDRRSRSPERKIKE---DSVTKSDE 305
Query: 620 PRGESPKQRPENDK 661
G S ++R + +K
Sbjct: 306 DEGRSSERREKEEK 319
>SB_5337| Best HMM Match : ResIII (HMM E-Value=2.4)
Length = 392
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +2
Query: 551 PRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQIKEETII 727
PR I H++E T + R Q PDN PG L PT + E +I
Sbjct: 309 PRRLFIIDHSLEGWITNAVYNGISRVRHADQIVRVIPPDNAPGALAPTELQAMPSEELI 367
>SB_35441| Best HMM Match : ResIII (HMM E-Value=0.078)
Length = 767
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +2
Query: 551 PRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQIKEETII 727
PR I H++E + T + R Q PDN PG L PT E +I
Sbjct: 676 PRRLFIIDHSLEGLITNAVYTGTSRVRHADQIVRVIPPDNTPGALVPTGLQATPSEELI 734
>SB_26626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +2
Query: 551 PRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQIKEETII 727
PR I H++E T + R Q PDN PG L PT + E +I
Sbjct: 710 PRRLFIIDHSLEGWITNAVYTGISRVRHADQIVRVIPPDNAPGALVPTELQTTRSEELI 768
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 28.3 bits (60), Expect = 8.2
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 3/127 (2%)
Frame = +2
Query: 437 GRS*DEHHSN*NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSA 616
G+S D +R+ R R R PSR +S + R +SP+R+ +
Sbjct: 404 GKSEDNSSLRRSRSRERNMARDRDDRRPPSRSRRDSSLRRQRSPLRNR--------SPRW 455
Query: 617 APRGESPKQRPENDKPDNVPGYLRPTRTSQIKEET---IIHDTEVSSRRGVEFGVELRRR 787
R SP+ R D G +T + + E+ +++ S V+ +E RRR
Sbjct: 456 RGRSPSPRSRRRRRSSDRYKGSFSEGQTGKSESESDNELVNFELDSDEEDVDKIIERRRR 515
Query: 788 ALNVLQR 808
+ R
Sbjct: 516 QRQAIVR 522
>SB_49729| Best HMM Match : Vps54 (HMM E-Value=3.7)
Length = 353
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 466 LKPSVQSNQSNLKKNTRKSKSLIHRITSPE 555
L PS+ Q+ + T K +HR+TSPE
Sbjct: 160 LVPSLPERQTGQRNRTNKLLMNLHRVTSPE 189
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +2
Query: 533 STESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQIK 712
S +P RS+ ++ T ++ + + RG R + K RPTR S K
Sbjct: 646 SCRTPRDRSRENGKNHQRTKSSGKDSTCSTRGSRDTSRDTSCKDTTGSAGTRPTRQSPRK 705
Query: 713 EETIIHDTEVSSRRG 757
++T SSR+G
Sbjct: 706 SAAKNNETPKSSRKG 720
>SB_42323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 280 TVRCSLMLYLNRSFISRFLGW 218
T RC+++L+L R F+SR L W
Sbjct: 173 TARCAVILWLYRLFLSRSLYW 193
>SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025)
Length = 2182
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 387 PKPETLRHKNDHPNVTEDEVEMNTTVIKTERSIESIKPQEEYAKVQVAYP 536
P P T ++ EV +TT + E+++P E+ A+VQV +P
Sbjct: 1914 PTPTTEAATTTGKVLSSTEVMTDTTPTIVGSTTETVRPPEKPARVQVKFP 1963
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +2
Query: 533 STESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQIK 712
S +P RS+ ++ T ++ + + RG R + K RPTR S K
Sbjct: 1313 SCRTPRDRSRENGKNHQRTKSSGKDSTCSTRGSRDTSRDTSCKDTTGSAGTRPTRQSPRK 1372
Query: 713 EETIIHDTEVSSRRG 757
++T SSR+G
Sbjct: 1373 SAAKNNETPKSSRKG 1387
>SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 823 RSSHCSLQHVQRSSTKLHAKLHATTTAHFR 734
R S C + Q+++T++HA +H H+R
Sbjct: 36 RCSRCQKKTCQQTTTRVHAAMHLVIRIHWR 65
>SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73)
Length = 617
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 518 SPSRLSTESPVPRSKSPIRHTVETVTTKITKSAA---PRGESPKQRPENDKPDNVPGY 682
SP+ T P +S S + + +T +K AA P +PK E P N P Y
Sbjct: 408 SPAAAKTSGPPAKSASNHKCSPAKPSTPASKDAAAKPPTSPAPKPEDEATGPPNKPSY 465
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,235,435
Number of Sequences: 59808
Number of extensions: 412287
Number of successful extensions: 1828
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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