Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00046
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 38 0.007
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 38 0.007
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 35 0.062
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 34 0.11
Z81514-6|CAB62802.1| 712|Caenorhabditis elegans Hypothetical pr... 32 0.58
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 32 0.58
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 31 1.0
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 31 1.0
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.0
AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical ... 31 1.3
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 30 2.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 2.3
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 2.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 2.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 2.3
AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical ... 30 2.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 2.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 2.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 2.3
U88167-1|AAB42226.1| 319|Caenorhabditis elegans Hypothetical pr... 29 3.1
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 3.1
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 3.1
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 29 3.1
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 29 4.1
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 28 9.5
AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 28 9.5
AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical... 28 9.5
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +2
Query: 512 RESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRP 691
R+ P + + P P+S+ + VE V K P + Q+P K + V G R
Sbjct: 1452 RKEPKKANEPGPAPKSEKAVEKAVEKVEKKPKSPQKPPAKPTAQKPPLKKTEEVDGIERE 1511
Query: 692 TRTSQIKEETIIHDTEVSSRR 754
S KE ++ + + + ++
Sbjct: 1512 ASESSSKESSVAPEEKKNPKK 1532
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/89 (21%), Positives = 37/89 (41%)
Frame = +2
Query: 488 INQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPD 667
+ + + R+ P + + P P+S+ + VE V K P + Q P K +
Sbjct: 1423 VEKEKKEHRKEPKKTNEPGPAPKSEKAVEKAVEKVEKKPKSPQKPPAKPTAQNPPLKKTE 1482
Query: 668 NVPGYLRPTRTSQIKEETIIHDTEVSSRR 754
V G R S KE ++ + + + ++
Sbjct: 1483 EVDGIEREASESSSKESSVAPEEKKNPKK 1511
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 491 NQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKI-TKSAAPRGESPKQRPEND 658
N+TSRR+ E PS +PVP SKSP+ + S AP + + P++D
Sbjct: 616 NKTSRRLNEMPSPTPANAPVP-SKSPVSGASNNPFANLGGPSPAPAADGAGRAPQDD 671
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 426 NVTEDEVEMNTTVIKTERSIESIKPQEEYAKVQVAYPQNHQSRDLNHRSDILLKRS 593
N++ + + V KTE +IE +K + Y K+ V++P+ H+ ++ LK++
Sbjct: 381 NISNENSKEVRDVKKTEFTIEDLKDELSYLKIDVSFPEAHEKSEIVLEQFCALKKT 436
>Z81514-6|CAB62802.1| 712|Caenorhabditis elegans Hypothetical
protein F26F2.7 protein.
Length = 712
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 491 NQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKIT--KSAAPRGESPKQRPENDKP 664
N S + E S + P P + I + E T K T + +S END P
Sbjct: 32 NDLSSVVNEDVSITMSAPPSPATPRKIDFSAEIETPKSTGIRRRLTLKDSIGSDLEND-P 90
Query: 665 DNVPGYLRPTRTSQIKEETIIHDTEVSS 748
++ P +P+R S + T+I D++ SS
Sbjct: 91 ESTPAIRKPSRISYDERLTVICDSQTSS 118
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/98 (22%), Positives = 39/98 (39%)
Frame = +2
Query: 470 NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRP 649
+R R + RR + SPS +SP R + RH + T +A+ + +
Sbjct: 303 DRTVRRRSPERRRQQRSPSVERRKSPQRRDERRRRHDSSENERRSTATASKKSRMDELEV 362
Query: 650 ENDKPDNVPGYLRPTRTSQIKEETIIHDTEVSSRRGVE 763
+ + P + Y+ T + I+ E E S + E
Sbjct: 363 KQEPPSDSEDYIAKTNLAPIRVEKSAEKVEKSRKSSSE 400
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/84 (20%), Positives = 34/84 (40%)
Frame = +2
Query: 473 RAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPE 652
+A ++ + ++ + P+ P P+S+ + E V K P + Q+P
Sbjct: 426 KAVEKVKEKEKKEQRKPNE---SGPAPKSEKAVEKAEEKVEKKPKSPQKPPAKPTAQKPP 482
Query: 653 NDKPDNVPGYLRPTRTSQIKEETI 724
K + V G R S K+ ++
Sbjct: 483 LKKTEEVDGIEREASESSSKKSSV 506
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +2
Query: 521 PSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRT 700
PS++ T SP +P HT+ + KI +S P P + P +L P RT
Sbjct: 792 PSQVITSSPRTNHLTPKSHTLSPLAVKIERST--------PLPPPPIPPHSPPHLTPQRT 843
Query: 701 SQIKEETIIHDTEVSSRRG 757
S++ + + +S G
Sbjct: 844 SKVSLDAVSEMKRISISGG 862
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +2
Query: 518 SPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTR 697
+P T+ PVP +P+ VETV + P+Q PE + V + P
Sbjct: 224 APVATYTQGPVP---TPVEQVVETVVEPQQAPEPEQAPEPQQAPEPTVVETVQEEIVPEI 280
Query: 698 TSQIKEETIIHDTE 739
++ + ++ +TE
Sbjct: 281 VAETEAPVVVAETE 294
>AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical
protein F54A5.1 protein.
Length = 424
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 551 PRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQIKEETIIH 730
P+S++P++ TV+TV T + + P+ + E+ N P +R RT +KE T +
Sbjct: 59 PKSETPVKLTVQTVPTPV--KSEPQSSNCSSPFEHPICSNAPRPIRSQRT-PMKEITTLD 115
Query: 731 D 733
D
Sbjct: 116 D 116
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 503 RRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPD 667
+ + E+ S +ST SP P +P V T TT T SAAP+ + P PE+ +
Sbjct: 82 KHVAEAASTMST-SPAP---TPTPEPVVTTTT--TTSAAPKRKEPIHAPESSSSE 130
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 503 RRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPD 667
+ + E+ S +ST SP P +P V T TT T SAAP+ + P PE+ +
Sbjct: 190 KHVAEAASTMST-SPAP---TPTPEPVVTTTT--TTSAAPKRKEPIHAPESSSSE 238
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 455 HHSN*NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPR--G 628
H S +R + +T ++ E P +SP + KSP + E + + + K +P
Sbjct: 1517 HESEESRTSVKKEKTPEKVDEKP-----KSPTKKDKSPEKSITEEIKSPVKKEKSPEKVE 1571
Query: 629 ESPKQRPENDKPDNVPGYLRPTRTSQ 706
E P + +K P PT+ S+
Sbjct: 1572 EKPASPTKKEKSPEKPA--SPTKKSE 1595
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 512 RESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQR-PENDKPDNVPGYLR 688
+E+ T+ VP+ +P+ T E V + S + + PK+ P ++VP
Sbjct: 3527 KEAAPSEPTQEDVPKGAAPLEPTQEDVPKEAAPSGPTQEDVPKEEAPSEPTQEDVPKEAA 3586
Query: 689 PTRTSQ 706
P+ +Q
Sbjct: 3587 PSEPTQ 3592
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 536 TESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQ--- 706
T+ VP+ ++P T E V + S + PK+ ++ +VP P+ Q
Sbjct: 3563 TQEDVPKEEAPSEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAAPSEPIQEEV 3622
Query: 707 IKEETIIHDTEVSS 748
KE T+ T+ S
Sbjct: 3623 PKEATLSEPTQEQS 3636
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 512 RESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQR-PENDKPDNVPGYLR 688
+E+ T+ VP+ +P+ T E V + S + + PK+ P ++VP
Sbjct: 3527 KEAAPSEPTQEDVPKGAAPLEPTQEDVPKEAAPSGPTQEDVPKEEAPSEPTQEDVPKEAA 3586
Query: 689 PTRTSQ 706
P+ +Q
Sbjct: 3587 PSEPTQ 3592
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 536 TESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQ--- 706
T+ VP+ ++P T E V + S + PK+ ++ +VP P+ Q
Sbjct: 3563 TQEDVPKEEAPSEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAAPSEPIQEEV 3622
Query: 707 IKEETIIHDTEVSS 748
KE T+ T+ S
Sbjct: 3623 PKEATLSEPTQEQS 3636
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 512 RESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQR-PENDKPDNVPGYLR 688
+E+ T+ VP+ +P+ T E V + S + + PK+ P ++VP
Sbjct: 3527 KEAAPSEPTQEDVPKGAAPLEPTQEDVPKEAAPSGPTQEDVPKEEAPSEPTQEDVPKEAA 3586
Query: 689 PTRTSQ 706
P+ +Q
Sbjct: 3587 PSEPTQ 3592
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 536 TESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQ--- 706
T+ VP+ ++P T E V + S + PK+ ++ +VP P+ Q
Sbjct: 3563 TQEDVPKEEAPSEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAAPSEPIQEEV 3622
Query: 707 IKEETIIHDTEVSS 748
KE T+ T+ S
Sbjct: 3623 PKEATLSEPTQEQS 3636
>AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical
protein Y69E1A.7 protein.
Length = 421
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = -1
Query: 476 LGFNYCGVHLNFVLGYIRMVVFMSKGLRFRSLLINTNVGQLSFYFDIFCFLCSRCNILE 300
+G G HLN + + ++ +RF + N+G F +FC N+ E
Sbjct: 171 MGSKISGAHLNPAVSFFQLTQGKINLIRFLVYAVAQNIGAFLGAFGVFCVYYDAINVFE 229
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 455 HHSN*NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPR--G 628
H S +R + +T ++ E P +SP + KSP + E + + + K +P
Sbjct: 1517 HESEESRTSVKKEKTPEKVDEKP-----KSPTKKDKSPEKSITEEIKSPVKKEKSPEKVE 1571
Query: 629 ESPKQRPENDKPDNVPGYLRPTRTSQ 706
E P + +K P PT+ S+
Sbjct: 1572 EKPASPTKKEKSPEKPA--SPTKKSE 1595
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 455 HHSN*NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPR--G 628
H S +R + +T ++ E P +SP + KSP + E + + + K +P
Sbjct: 1517 HESEESRTSVKKEKTPEKVDEKP-----KSPTKKDKSPEKSITEEIKSPVKKEKSPEKVE 1571
Query: 629 ESPKQRPENDKPDNVPGYLRPTRTSQ 706
E P + +K P PT+ S+
Sbjct: 1572 EKPASPTKKEKSPEKPA--SPTKKSE 1595
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 455 HHSN*NRAFNRINQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPR--G 628
H S +R + +T ++ E P +SP + KSP + E + + + K +P
Sbjct: 1517 HESEESRTSVKKEKTPEKVDEKP-----KSPTKKDKSPEKSITEEIKSPVKKEKSPEKVE 1571
Query: 629 ESPKQRPENDKPDNVPGYLRPTRTSQ 706
E P + +K P PT+ S+
Sbjct: 1572 EKPASPTKKEKSPEKPA--SPTKKSE 1595
>U88167-1|AAB42226.1| 319|Caenorhabditis elegans Hypothetical
protein D2092.6 protein.
Length = 319
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +2
Query: 470 NRAFNRINQTSRRIRESPSRLSTESPVPRSK--SPIRHTVETVTTKITKSAAPRGESPKQ 643
++++ R N T R+ E +T S V +S+ +PI T + KIT A+ ++
Sbjct: 92 SKSYERPNVT--RLPEKKWIRNTRSLVDKSRKINPIYAT--PIRKKITSKASVEPPIIEE 147
Query: 644 RPENDKPDNVPGYLRPTRTSQIKEETIIHDTEVSSRR 754
E VP Y+RP +T + EE II + E +++
Sbjct: 148 FSEE-----VPRYVRPLKTFKSSEEIIIEEKEKENKK 179
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = +2
Query: 500 SRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPG 679
+R +E P L + KSP H+ E + T+ T + E PE+ + + G
Sbjct: 2880 TREFQEEPEELEYKQEDNSRKSPSSHSQENLVTETTTTTTVTSEY-YDEPEHFE-EQETG 2937
Query: 680 YLRPTRTSQIKEETIIHDTEVSS 748
P +S ++ E + ++ V+S
Sbjct: 2938 KSSPAPSSHVESERQVLESPVAS 2960
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = +2
Query: 500 SRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVPG 679
+R +E P L + KSP H+ E + T+ T + E PE+ + + G
Sbjct: 2880 TREFQEEPEELEYKQEDNSRKSPSSHSQENLVTETTTTTTVTSEY-YDEPEHFE-EQETG 2937
Query: 680 YLRPTRTSQIKEETIIHDTEVSS 748
P +S ++ E + ++ V+S
Sbjct: 2938 KSSPAPSSHVESERQVLESPVAS 2960
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/76 (26%), Positives = 29/76 (38%)
Frame = +2
Query: 497 TSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKPDNVP 676
T+ E + +TE P P TVE T A+ E+ EN +P+
Sbjct: 491 TTTTTEEPTTTTTTEEPTEAPTEPSPTTVEATEASTTPEASTSSET--STTENSEPNQKT 548
Query: 677 GYLRPTRTSQIKEETI 724
S ++EETI
Sbjct: 549 STPVAPEASTVEEETI 564
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +2
Query: 485 RINQTSRRIRESPS----RLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPE 652
R+ TS + SPS PV + + T+ +++ + +P P P
Sbjct: 112 RLQTTSMIVESSPSPSFHSKKDGHPVYEERCRVSLTIPISSSEDLSAVSPPPPLPSVPPS 171
Query: 653 NDKPDNVPGYLRPTRTSQIKEETI 724
++ +P YL+PT + T+
Sbjct: 172 KERIKRIPSYLKPTPAPRSMSATL 195
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +2
Query: 491 NQTSRRIRESPSRLSTESPVPRSKSPIRHTVETVTTKITKSAAPRGESPKQRPENDKP 664
N+ + P +P P +P T + TTK TK AAP +P P P
Sbjct: 213 NKEVTTVAPVPKPAPVTAPAPNPPAPENTTAKVETTKPTK-AAPPAPTPVPNPVPSPP 269
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 165 IVQKKQLNYTRKLKISKHQPKKRLIKLRLRYNIKEQRTVKKAKA 296
+++ K+++ RK + KH PK+ I + IK+++ + KA A
Sbjct: 505 LMEMKKVSRDRKKDMLKHAPKRHKIAIVKEQVIKKKKMLAKAAA 548
>AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical
protein ZK484.4a protein.
Length = 919
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 581 VETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQ 706
VE T++AAP+ S K+R D P + R TRTS+
Sbjct: 386 VERARRTSTEAAAPQRRSLKRRNIEDVPKELLSPARTTRTSR 427
>AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical
protein ZK484.4b protein.
Length = 873
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 581 VETVTTKITKSAAPRGESPKQRPENDKPDNVPGYLRPTRTSQ 706
VE T++AAP+ S K+R D P + R TRTS+
Sbjct: 386 VERARRTSTEAAAPQRRSLKRRNIEDVPKELLSPARTTRTSR 427
>AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical
protein Y71F9AL.4 protein.
Length = 557
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +3
Query: 390 KPETLRHKNDHPNVTEDEVEMNTTVIKTERSIESIKPQEEYAKVQVAYPQNHQSRDLNHR 569
KP + +V+++E + ++ +RS+E I E + + P N+ +H
Sbjct: 68 KPTGKKRDEKRKSVSKEEDDEKPAPLERQRSVEQIANMENTPESVLKPPDNNGKPKPSHE 127
Query: 570 SDILLKRS 593
D +K++
Sbjct: 128 KDAKVKKN 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,635,770
Number of Sequences: 27780
Number of extensions: 306494
Number of successful extensions: 1440
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -