BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00045 (714 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 111 5e-25 11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 111 5e-25 01_06_1261 - 35826513-35828941,35829201-35829294 29 3.7 >12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738, 3429821-3430230,3430323-3430556,3430934-3431378, 3432300-3432390,3433292-3433518,3433786-3433861, 3434009-3434134,3434221-3434384 Length = 757 Score = 111 bits (267), Expect = 5e-25 Identities = 51/85 (60%), Positives = 60/85 (70%) Frame = +1 Query: 1 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXKLPRKTHKGLR 180 I DKV + + EK IPVD+VF +DEMID I +RW +LPRKTH+GLR Sbjct: 191 IADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 250 Query: 181 KVACIGAWHPSRVSFTVARAGQKGY 255 KVACIGAWHP+RVS+TVARAGQ GY Sbjct: 251 KVACIGAWHPARVSYTVARAGQNGY 275 Score = 109 bits (261), Expect = 3e-24 Identities = 51/85 (60%), Positives = 63/85 (74%) Frame = +3 Query: 255 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYXEVNNDFVMIK 434 HHRTEMNKK+Y+IG K G+ + A TE+D +EK ITPMGGFPHY V D++MIK Sbjct: 276 HHRTEMNKKVYKIG-----KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIK 329 Query: 435 GCCMGPKKRIITLRKSLRVHTKRAA 509 GCC+GPKKR++TLR+SL T R A Sbjct: 330 GCCVGPKKRVVTLRQSLLKQTSRLA 354 Score = 47.6 bits (108), Expect = 1e-05 Identities = 21/26 (80%), Positives = 23/26 (88%) Frame = +2 Query: 509 LEKINLKFIDTSSKFGHGRFQTPADK 586 LE+I LKFIDTSSKFGHGRFQT +K Sbjct: 355 LEEIKLKFIDTSSKFGHGRFQTTDEK 380 >11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283, 3276406-3276815,3276942-3277200 Length = 389 Score = 111 bits (267), Expect = 5e-25 Identities = 51/85 (60%), Positives = 60/85 (70%) Frame = +1 Query: 1 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTXKLPRKTHKGLR 180 I DKV + + EK IPVD+VF +DEMID I +RW +LPRKTH+GLR Sbjct: 191 IADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 250 Query: 181 KVACIGAWHPSRVSFTVARAGQKGY 255 KVACIGAWHP+RVS+TVARAGQ GY Sbjct: 251 KVACIGAWHPARVSYTVARAGQNGY 275 Score = 109 bits (261), Expect = 3e-24 Identities = 51/85 (60%), Positives = 63/85 (74%) Frame = +3 Query: 255 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYXEVNNDFVMIK 434 HHRTEMNKK+Y+IG K G+ + A TE+D +EK ITPMGGFPHY V D++MIK Sbjct: 276 HHRTEMNKKVYKIG-----KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIK 329 Query: 435 GCCMGPKKRIITLRKSLRVHTKRAA 509 GCC+GPKKR++TLR+SL T R A Sbjct: 330 GCCVGPKKRVVTLRQSLLKQTSRLA 354 Score = 54.8 bits (126), Expect = 6e-08 Identities = 25/34 (73%), Positives = 27/34 (79%) Frame = +2 Query: 509 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 610 LE+I LKFIDTSSKFGHGRFQT +K F G LK Sbjct: 355 LEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388 >01_06_1261 - 35826513-35828941,35829201-35829294 Length = 840 Score = 29.1 bits (62), Expect = 3.7 Identities = 14/49 (28%), Positives = 27/49 (55%) Frame = +3 Query: 219 VVHCSSCWSERLHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSE 365 ++ SS SERL E+ + I RIG+ +H ++G + + + L++ Sbjct: 376 LIEDSSKLSERLKQVEEVLQTIQRIGKSVHSENGNIHQQLTEVDDSLND 424 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,101,916 Number of Sequences: 37544 Number of extensions: 415077 Number of successful extensions: 895 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 868 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 893 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1851002996 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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